naa60 (naa60,nat15,LOC107690248,LOC107568044,LOC107685925)


Basic Information

Item Value
gene id naa60
gene name naa60,nat15,LOC107690248,LOC107568044,LOC107685925
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 28802090 ~ 28812124 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245549.3
CTCGAGTATCGGTACAGCCCTGAAACAGCGTGTTTACAGCTAAAGAGGTGAAACAGTCACAGCATAGGCCTGAGCGGGACACACACACTGCGGCCGCCGTAGCTCCACAGCAGCGCACTGAGAGGCGTTAGCAGCGGAGCTACAGCCGGGGAGCTAACCGGAGCTAATGCGCCGCGGAGACTCGCACAGCGCCGCACAGCCGCAGCCGAATGTCTCACCTCCGTCCGGGACACTCACCTGCTCCTCAGCACCATGATCCCGCTGCTCTGAGCTCTCCCCGCGGAAAGACCGACGAGCCCTCGCCCGCGTTTCTGCCTGTCCGAGCGCCGAAATAAGgtgtgAATGACCGACGTGGTGCCCCTCACTGCGCTCAGCGAAATCAAGCTCCGTCTTCTGTGCCAAGATGACATAGACAGCGTTAAAGTGCTCTGTGGAGATTGGTTCCCCATTGAGTATCCTGACTCATGGTACCATGACATCACGTCAAACAAGAAGTTCTTCTCCCTGGCTGCTACCTTCAAAGGGGGCATCGTGGGGATGATTGTGGCTGAAATAAAGGGCAGAACAAAAGTACACAAAGAGGATGGGGACATTTTGGCCTCCAGCTTTCCTGTTGACACTCAGGTTGCATACATCTTGAGCTTAGGAGTGGTAAAGGAGTTCAGAAAACATGGAATAGGTTCTCTGTTGCTGGACAGTCTAAAGGACCACATCTCCACCACGGCCCAGGACCACTGCAAGGCCATCTATCTTCATGTACTCACCACCAACCTCACAGCCATCCATTTCTATGAGAACAGAGACTTTAAGCAGCATCATTATTTGCCCTATTATTACTCGATCCGAGGAGTGCTCAAGGATGGATTTACATACGTCCTTTACATCAACGGCGGACATCCTCCTTGGACAATCTTTGATTATATTCATCATATAGGGTCAGCCTTGGCCAGCCTAAGCCCGTGCTCCATTCCACAGCGGATCTACCGCCAAGCACAGAGTCTTCTGCGCAGCTTTCTGCCCTGGTCAGGCATTTCATCCAAGAGCGGCATTGAGTACAGCAGGACCATGTGAGAGCTGTCCGTCACCAGCCCTGCAGgTGAAGAGAATTTCAGTCTTACCAGTCCAAAACCTTAACCCCAGTGGTGGTGAATTTTACACAAAGCCCTGTCTCGGTTGCCTGCATTCCTCCCCACCCCAGCCCGTGTATTATATCTGTAAATAATATATGCTCTGATTAATATATGCATTGTCTTTAGTAGACCATCCTCTTGATATGAACCTTCCAGTCCACTTCACGCCTGTAATTCCGCTGCTATGTAGAAAACGTTCTATGGCTCTcccatatttttaatataaatagattttta

Function

symbol description
nat15 Predicted to enable H4 histone acetyltransferase activity; peptide alpha-N-acetyltransferase activity; and protein homodimerization activity. Predicted to be involved in several processes, including chromosome segregation; nucleosome assembly; and protein acetylation. Predicted to act upstream of or within chromatin organization. Predicted to be located in Golgi apparatus and membrane. Predicted to be active in Golgi membrane. Orthologous to human NAA60 (N-alpha-acetyltransferase 60, NatF catalytic subunit).
naa60 Enables H4 histone acetyltransferase activity; peptide alpha-N-acetyltransferase activity; and protein homodimerization activity. Involved in cell population proliferation; nucleosome assembly; and protein acetylation. Located in Golgi membrane.

NR:

description
N-alpha-acetyltransferase 60

GO:

id name namespace
GO:0006334 nucleosome assembly biological_process
GO:0043967 histone H4 acetylation biological_process
GO:0007059 chromosome segregation biological_process
GO:0008283 cell population proliferation biological_process
GO:0017196 N-terminal peptidyl-methionine acetylation biological_process
GO:0000139 Golgi membrane cellular_component
GO:0004596 peptide alpha-N-acetyltransferase activity molecular_function
GO:0010485 H4 histone acetyltransferase activity molecular_function

KEGG:

id description
K21121 NAA60; N-alpha-acetyltransferase 60

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245549.3 True 1367 mRNA 0.51 7 28802090 28812124

Neighbor

gene id symbol gene type direction distance location
tmem114 tmem114 coding downstream 139788 28633776 ~ 28662302 (-)
LOC103034330 sept12,LOC107733855,LOC107568113,LOC107690244,LOC107738615 coding downstream 777289 27852176 ~ 28024801 (-)
LOC103033698 LOC108436663,LOC108256318,LOC105900006,LOC106596483,LOC107738612 coding downstream 1172844 27604572 ~ 27629246 (-)
alg1 alg1 coding downstream 1212792 27577763 ~ 27589298 (-)
LOC103029886 LOC107738631 coding downstream 1232688 27550309 ~ 27569402 (-)
eci1 NA coding upstream 9844 28821968 ~ 28829514 (-)
clcn7 clcn7,LOC107738625,LOC107590582,LOC107685922,LOC107733862,LOC107690253,LOC107568008 coding upstream 92937 28905061 ~ 28933768 (-)
ptx4 NA coding upstream 122502 28934626 ~ 28943090 (-)
usp7 usp7 coding upstream 154361 28966485 ~ 28995105 (-)
grin2a grin2a,LOC107690256,LOC107685916,LOC107568390 coding upstream 499286 29311410 ~ 29583262 (-)
G14394 NA non-coding downstream 86807 28697362 ~ 28715283 (-)
G14339 NA non-coding downstream 171276 28630590 ~ 28630814 (-)
G14333 NA non-coding downstream 251386 28550453 ~ 28550704 (-)
G14330 rbfox1 non-coding downstream 264900 28519571 ~ 28537190 (-)
G14312 NA non-coding downstream 610621 28191074 ~ 28191469 (-)
LOC111193842 NA non-coding upstream 917 28813041 ~ 28815878 (-)
G14415 NA non-coding upstream 87229 28899353 ~ 28900100 (-)
G14412 NA non-coding upstream 91637 28903761 ~ 28924250 (-)
G14417 NA non-coding upstream 138621 28950745 ~ 28951228 (-)
G14420 NA non-coding upstream 148217 28960341 ~ 28963827 (-)
carhsp1 carhsp1,LOC107733846,LOC107576530,LOC107738622,LOC107590589,LOC107690249 other downstream 5632 28749534 ~ 28796458 (-)
fam214b fam214b,LOC102776582,LOC107684984,LOC107595918,LOC107672624 other downstream 1763344 27023495 ~ 27038746 (-)
G14113 NA other downstream 1899377 26899005 ~ 26902713 (-)
fam109a LOC108415891 other downstream 1968477 26824856 ~ 26833613 (-)
G13960 dscaml1 other downstream 2103297 26670119 ~ 26698793 (-)
emp2 emp2 other upstream 801362 29613486 ~ 29643303 (-)
dexi dexi,LOC107590611 other upstream 945563 29757687 ~ 29761252 (-)
LOC111193878 NA other upstream 1076675 29888799 ~ 29892305 (-)
rps15a RPS15A,rps15a,MGC114789,LOC107686992 other upstream 1448894 30261018 ~ 30268350 (-)
LOC103043612 LOC108259106,LOC108412590,LOC107654745,LOC107710331,LOC107602379,LOC105006578 other upstream 1861936 30674060 ~ 30725921 (-)

Expression


Co-expression Network