LOC103032739


Basic Information

Item Value
gene id LOC103032739
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 30882104 ~ 30884340 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245587.3
TCAGCTGTGTTGGACAGGCACACATCCACTAAACGCCATTAACGGACCCTTAGAGACCCTCACAGCTGACTTATCGCACTCCAGTTAATCCTTCTGGACCTTCTGTTCTCTACCACAACATGATGTTTCTGACTGCTGGTTTCTGTCTTCTGGCCATGGTGGCCTCCTCCATGGCACAGGCAACAAGCAACACTACGGTGGATCCACCATTAAACAGCACAACAGTAGGACTGACTACTGGCAACGTAACCGCTGTGCTGCCTGTAACGAACGCCACTGTATCTGCAAACAGCACCACGGTTGCTGCTAACGCCACCACGGTACCATCCAACATCACCACTGTACCATCCAACGTTACAACAGTTCCATCTAACACCACTACAGTGCCATCCAACGCCACCATGATTCCATCCAATGCCACCACGGTGCCATCCAACATCACCACCACGCTCGGACCCAACGTCACCACTGTGATTACCGCCACAACGCCTTCCGGCAGTCCTGACCTTCAGTCTACCCTACTACCGATCCTTCTCCCCGCCCTGTATCTGCTGTGGAACCGATCATAACCTGGTTCAGGTGATGAACCAACCACAGACTCTACATCACCGTGAAGATCTCACCCTCTTTACCGCCATTTATAGACTTCTTACTGGTCTCGGACCTGTGATCGTCCGGCCCGGTGCTCAGGAGCATTGAATTATACGTAACTGGGCCACGAAGCTCACTCTGCGAacgcagttttttttttttattattacttaagATGATGAAGTTTTTGGTCGGCAAGATCAAGACTAAATTGCACAAAACAGATTTGTTCCCCTTTAATTTGTAGcactgattaaaaatatatatttatacgtTTGTCTTTGTTAAAGACGTATCCGTGGATGTCACCTTCATTTTTGTATATGTTGTTTAATAtgtagtaataaaaaataaataaataaattaactacaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245587.3 True 969 mRNA 0.46 2 30882104 30884340

Neighbor

gene id symbol gene type direction distance location
tmc5 tmc5 coding downstream 921312 29942423 ~ 29960792 (-)
socs1 socs1 coding downstream 1001190 29878041 ~ 29880914 (-)
grin2a grin2a,LOC107690256,LOC107685916,LOC107568390 coding downstream 1298842 29311410 ~ 29583262 (-)
usp7 usp7 coding downstream 1886999 28966485 ~ 28995105 (-)
ptx4 NA coding downstream 1939014 28934626 ~ 28943090 (-)
LOC103033392 NA coding upstream 52946 30937286 ~ 30945392 (-)
LOC111193890 NA coding upstream 62425 30946765 ~ 30954116 (-)
LOC103046043 NA coding upstream 71853 30956193 ~ 30962532 (-)
LOC111193897 LOC108413061 coding upstream 80208 30964548 ~ 30966942 (-)
LOC103046348 NA coding upstream 82929 30967269 ~ 30970158 (-)
G14748 prdm1,LOC106941180,LOC103155240 non-coding downstream 114284 30766362 ~ 30767820 (-)
G14720 NA non-coding downstream 209635 30672052 ~ 30672469 (-)
G14718 NA non-coding downstream 215655 30661819 ~ 30666449 (-)
G14694 NA non-coding downstream 457817 30424072 ~ 30424287 (-)
G14672 NA non-coding downstream 623227 30258418 ~ 30258877 (-)
G14778 NA non-coding upstream 20144 30904484 ~ 30904698 (-)
G14807 rpl14,LOC107710319,LOC107688416,LOC107654689 non-coding upstream 40500 30924840 ~ 30928389 (-)
G14820 NA non-coding upstream 99200 30983540 ~ 30984031 (-)
G14834 NA non-coding upstream 164016 31048356 ~ 31048607 (-)
G14876 ddx41,LOC107749764,LOC107750345 non-coding upstream 296646 31180986 ~ 31193793 (-)
LOC103043612 LOC108259106,LOC108412590,LOC107654745,LOC107710331,LOC107602379,LOC105006578 other downstream 156183 30674060 ~ 30725921 (-)
rps15a RPS15A,rps15a,MGC114789,LOC107686992 other downstream 613754 30261018 ~ 30268350 (-)
LOC111193878 NA other downstream 989799 29888799 ~ 29892305 (-)
dexi dexi,LOC107590611 other downstream 1120852 29757687 ~ 29761252 (-)
emp2 emp2 other downstream 1238801 29613486 ~ 29643303 (-)
LOC103045124 NA other upstream 5266 30889606 ~ 30892648 (-)
G14781 LOC107602351 other upstream 30570 30914910 ~ 30923249 (-)
trnap-agg_1 NA other upstream 39472 30923812 ~ 30924087 (-)
G14839 NA other upstream 169424 31053764 ~ 31055503 (-)
nfkb1 nfkb1,LOC106536450 other upstream 1237882 32122222 ~ 32159963 (-)

Expression


Co-expression Network