LOC103035550 (paqr4,paqr4a,LOC105897660,LOC106601588)


Basic Information

Item Value
gene id LOC103035550
gene name paqr4,paqr4a,LOC105897660,LOC106601588
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 14166440 ~ 14197240 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251025.3
CCAATCTGCTGCCTTAGGAAACGGGAGAGAGAAGATGGTCGGGGCTTTCTGGGGACAGAAGGTCCAGATTTATCGCGAATATTCGCAGCGCGCGGCAAAACTGGATGTTTATCAGCGCTGAAAGACGAGGGGATGAAAAACAGCGGATTTAAAGGCGTCCAGCGTAACTCACTCTGTAGCGACGGTTTCATTAACGTTAACGTTACGGTCTCTATGGGCCGTTAGCAAACCGCCTAGCAACCGGGACACGACCACTGTTATTGAAACCCTGGGCGTTTTTATGGCCCCGGTTTGGGCTTTTTTTCAAGAAATTTCTTTGGGAAGTTCGTCCTTGCTTTGTCCATCTGTAAGCCAGCCCCTTTTCACCTTTTCTGGAGGTGACAGCAGCTATCTCGTGCTGCTAACCTGCTAGCCTAGCCACAGCTGTGTGTGGAGCCGGGGAGAGACATGGCtgtcagctagctagctaactaactacagGACTGAATGGGTTGAATGGGTGACTTctatttctttcccttttttggtCAAAGTTTTCTTTAAGCTGAGCCATAATGTGCTCTGTTCTGTGGTAGAATGTTTAATTTCTCCATTGAATAGGCAGAACTAGTTATTGAACCTGAAACAGCCAACCTAGTTAGTTACCTGTGCAGAGAAGTGCATGTGCAAGTGTTTGGATCCACATTCCCCGTGAAATTTCATTCAGAACTgatttaaaactgattaaaaacttgAAAACTGATTAGCACTAGGTTGACTGACATTTCAGGACACACAGATTCATATACAGGTACATTCATCACACCAGCATGCTGTTAAACCATACTGTGAGCTGAAGCTGATTGAACAAATTGAATTGAACAAATGAAACTATTCATGTTGGCCTGCTTAAATGGTGAACACCTAGCTACAAAACAGTTGTGTATTAGCTAGGGATAGATTAGTCACATGTTAATGAACATGTTATAAATGTGGTTGGTCGGTCCAAGCTTAGTAATATCGAGATAATAACAACACCATATTGAGAATAATTTCTGCACTGGGTGCAAAGCTGGGTGTCACACTTTGCTCACTTTTTGTTGACTTTCCCAACAAcaacaccaaaaaaaagaacattcaacatttaaaaattcaGTGATGAGTGTTGGTGACTTTGTTGCCACCATAATGAAGTCCCACTACAAACTCATAGAGAAGCGGAAGCTGGCGAGAAATTCACCTTGCAGTCAAAGCTGACCGACTGATTATTCTTCTCCTCTTTTGGGAGAGCCACACAAGCAGATTGGAGTGTTGGAGATTGCTGAGGAACTTGAGCAAGAGAGCCCTGGAGTCCTACACCTGGTGTGGAAGATGCCTTCACACTGCATGCCAAGGTGACAAGACTCAAGACCATACCAGGCTCAAAGGTTACTGCACTGGGCGTGATTGACTGTATAGTTAAATGTTGCAACATTGTGCACAGCTGGGTGTCATTATGAAGGCTGTGTGCTTTTTCTTTCTACATCCTTGCGGATGACAACTCGGACCACAATCCAGAAGCGGGCAGGTACAGaaaagacagacaaagacaACGGATCACACTACTGCTCAGGCACAGGAATACCAACCAGTCTATTTCTTTGACTTTCCTGCCTTCCCGGTCAGCCAGCCATAGCTGCATAATGCAGGCATAAGTTCACATCCCAATGCCTATGGTGTTCAATTCCCTCTTTATGAGCAGTAACTGTGCTCCGCCTGTGCATACATGTGCagctgtggtggtggtgttgctgttgtgttgttgttCTCGTCCTATCCGTCCTCGCTGCTATGGCCTGTCTAAATGGCCCCAGGTTACTGGACTGGGCAAATTCTCCACCACACCTGCAGTTCAACAAATACGTCCTGACTGGCTACAGACCCATATCGTCGGTTCAGGACTGCATCAGGAGCCTCTTCTATCTACACAATGAACTGGGCAACATCTACACGCATGgAATCCCTCTGCTCTGTTTTCTGGTGCTGCTACCTCTGAACATCCCCTGGTCTCAGATCACCGTGACATGGCTGGGTGTGGTGCACTTCCTGGCCTGCTTATCTCCACAGCTGGGCTCTGTGGTCTATCACCTATTTATGAACCACGAGGGCGGCGAGCCTGTCTACAAAACCCTGCTCACATTAGATATGTGTGGCATCTGTATGATCAACACCTTGGGTGCTCTGCCCATCGTGTACAGTACGCTGCTGTGTTACCCGTTCACCCGCACCGTGGCCCTTGTAATCTACATCCTGCTGTCCAGCTACGCCATCTACTGCGCCATCACGGCCCGGAGCCGCGTGCGGCGCCTGCGCTCCTTCGCCTGGCAGGCGCTCTTCCGCTTCTCCTTCTTCCTGCTGCGCGGGGTGGGCGTGGGTGGAGGAAGCCCCACCTCCCTGCGCCACTTTCTCACAATGGACGCCCTGGCGGTGGTGGGCGGGGTCATCAACATCACCCGCATCCCCGAGAGGTTCCGGCCCGGCCTGTTCGACTACTGGTGCAACAGCCACCAGATCATGCACGTTCTCGTGGTGGGCTCCATCCTCTACCTGCACTGGGGCGTGCTGGACGACTTGTTGTGGATCAACACCTATCACTGTCCCATGGACTGACCCGCCAGGACCACTGGGAGAACTGGGAGCGGGCTGGAACAGGGTGCCAAGACCTCTAGTATGGGAAGTGTCTGGGATTTCAGGGATTGCTTtgggagtgggggggggggggggttatttaTTCGTTGAACAGGTGAGCGCTGAAGAGTTTGACATGCGTCGTGCCGCCTTTCACACACGTGCTTGTTTGTGCCCTCAAATGCAAGAATGTACATATCTGCATTTACCTAACAGTGTCTGTGCATGGAAGTTTAGTCTAGAGTTGACTCATACAAAAGACTGAAATTCATTCGGTACCTGCCGGCGTCGTGGGTacgcacaagcacacacacgTACATGCGTATAGTAACACACTGAAAAGAAACGAATGCATTCGATTGACTTGATTGTACAtccaaaaatatgtaatatcaACACAATTATATCTCTGTTTTACTTGCTTTGTGGCGGGTAAAGAAGGAAGTGCGAGTGCCACACAGCTCTAGGGGTctggggttgtgggttcaattctCACTGTGGATCTGTGAGGAGTTGTACGTATTCTCCCTATATCCACCCCAGGTTTATCCCAccttctattaaaaaaaaacacacatggtAGGTAGGATTAGTGGCCATGCTAATTTCCTAAATACggaaataaataatgcaattgTAGGGGCATTGAGGACTGGAGAGCTTGCAGAGAGCTTGCAGAATTACGTTAGTACAAAACGTTAGTATTAATACgttaatattttgtgtaccAACCTCACAGATAAGTACTATTAAGATTAGATTAAACATAGTATATACCTTatagtgttagtgtgtattaTATGCAGCTGGGATGAAGCCCAGGCAAGCCCATAACCGTTAAGCAGACGACGATATTTACATTTGACTGATTCCAGGATTGTTttagcatcagcatcagcagccggagcccgagagagcacaattgttagagaagattttttaaaattattattatgaaaaaaaaaagtaattttggatcatttttattagtcattttttcataCATCATGGCATTTTGACATAATATAAGCAAAGTAAAATATgtgacatatttaaaataatataaaaaaaagtttttttaatttaaaaaacaaacataaaatagagGTTCTGGCCCAATAATGAATCAATTTGAATCAAGTACATTCACTGCATATTTCTTTTCAGTGTTCGAGACTCTCAGAGGCATGAGGTCCGGCATATATCATGTCTACACCAGCGTCCAGagcattaatttaaaaaaaaaaactctgatgtTGTGTCTTAATGTATGTACAAAATGTAAGGTGCAACTGAGCCGCCAGTCCGTCGGCTCgataacgaaaaaaaaaaaaatagtttgcaTTA

Function

symbol description
paqr4a Predicted to enable signaling receptor activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human PAQR4 (progestin and adipoQ receptor family member 4).
paqr4 Predicted to enable signaling receptor activity. Predicted to be integral component of membrane.

NR:

description
PREDICTED: progestin and adipoQ receptor family member 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251025.3 True 3993 mRNA 0.46 3 14166440 14197240

Neighbor

gene id symbol gene type direction distance location
LOC103035240 LOC103035240,LOC108427335,LOC107658445,LOC107729508,LOC108280773,LOC107583063 coding downstream 18158 14117591 ~ 14148282 (-)
LOC103038885 shank1,LOC108427331,LOC107732841 coding downstream 201602 13683879 ~ 13964838 (-)
LOC103033311 si:ch211-51c14.1,LOC108427330,LOC107732900,LOC107729493,LOC107551153,LOC105012945,LOC106595301 coding downstream 494758 13631779 ~ 13671682 (-)
syt3 syt3,LOC107551154,LOC107563990 coding downstream 625515 13424026 ~ 13540925 (-)
med25 med25 coding downstream 778501 13338001 ~ 13387939 (-)
LOC103039514 LOC108427305 coding upstream 51434 14248674 ~ 14292162 (-)
LOC111193418 NA coding upstream 133762 14331002 ~ 14333447 (-)
armc5 armc5 coding upstream 144680 14341920 ~ 14350288 (-)
LOC103037078 LOC103037078,LOC108427313 coding upstream 157112 14354352 ~ 14360091 (-)
LOC103036770 tceb2,LOC103036770,LOC108427344,LOC107564001,LOC108280902,LOC105012960 coding upstream 164394 14361634 ~ 14371508 (-)
G10430 NA non-coding downstream 144551 14021687 ~ 14021889 (-)
G10429 NA non-coding downstream 156027 14010176 ~ 14010413 (-)
G10413 NA non-coding downstream 248602 13917124 ~ 13917838 (-)
G10379 NA non-coding downstream 491147 13673955 ~ 13675293 (-)
G10303 NA non-coding downstream 580521 13585450 ~ 13585919 (-)
G10561 NA non-coding upstream 109032 14306272 ~ 14306530 (-)
G10595 NA non-coding upstream 495542 14692782 ~ 14694894 (-)
G10649 NA non-coding upstream 510093 14707333 ~ 14708613 (-)
G10654 NA non-coding upstream 574090 14771330 ~ 14771618 (-)
G10782 polr3d non-coding upstream 822051 15019291 ~ 15020115 (-)
LOC103034594 ppp1caa,LOC103034594,LOC105897688,LOC108280818,LOC103367324,LOC101477563,LOC105894037 other downstream 83333 14038858 ~ 14083107 (-)
LOC103034410 lrrc4b,lrrc4ba,LOC103034410,LOC107680881,LOC107551155,LOC107667844,LOC107563987,LOC107732840 other downstream 873562 13149357 ~ 13292878 (-)
G10089 akt1s1,LOC107564011,LOC107680841 other downstream 1349254 12813025 ~ 12817186 (-)
LOC103022087 foxd1,LOC103022087,LOC106569011,LOC108432165 other downstream 2488332 11676154 ~ 11678108 (-)
G9632 atp5h,LOC103042933,LOC103361245,LOC107670447 other downstream 2822178 11340140 ~ 11344262 (-)
G10560 NA other upstream 43821 14241061 ~ 14243794 (-)
hsd3b7 hsd3b7,LOC106601563 other upstream 422136 14619376 ~ 14656561 (-)
LOC103040656 LOC108427315 other upstream 590830 14788070 ~ 14797643 (-)
G10767 NA other upstream 725725 14922965 ~ 14923959 (-)
LOC103043825 pax10,LOC108427317,LOC107689663,LOC108280587,LOC107557340,LOC107579793 other upstream 763592 14960832 ~ 14981569 (-)

Expression


Co-expression Network