prrg2


Basic Information

Item Value
gene id prrg2
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 15174397 ~ 15182700 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251061.2
TCTGTTTTACTGAGGGAAGAAGAGCTGTGGGGATTTTTCAGTTGGTAATCAGCTAGGCTACAGGTGAACGGGCTGACAGTCGgattattaatgttaaatatgtgaGAGTAATTCTCTGAGAGCTCATTCTGACCAGATATTGATTCACCCAGCAGAGGAAAGAAGAACTGTGGGatatactttaatatactttaatatacaTTTCAGTTGTGAGCAGTTCCTGGTCTGGGGAGGATTTTAGCCTGTAGGCAAGATGCCAGGACTTGGAAAAATCTGCATTTGTGTGCTGGCCCTGTTACATCTGGCATGGGCGAGGTGCATCAACAAGGGGAACAACGtttttatcTATGATAAGTCTGCGGACTCATTCCTGTCTCGGTCGTTGCTGTACAACAGCTGGGATTTTGAACTGGTAACACCAGgcaatatagagagagagtgctacGAGGAGCAGTGCACCTACGAGGAGGCCAGAGAGGTGTATGAGGATGACCTAAAGACGcaaaaatTTTGGGCAGAGTATACCAACTCTCACAGTCCTCCTAAACCGATTGATCTTCCTGGTCTGTTGTCCGGGGTTGTGGCAGCTGTGACCATAGCTGTCATAGCCTTAGTGCTTGGCTGTTACTGTTACAAGAACAAGGCCAGGAAAAGGCAACCCAGcagTGTTCCAGTGCAGATGGCCGCAGATGCCCGTCCAGCTCCAGAGTTGGTACCATTGGCTGGTATTACAGCTCCAGGTCTGCCATCCTACAGGGAAGCCCTGGACCACAGCGGGCAATACGATGCCCCTCCACCACCCTATGCCGGAGAGACGCCATCTGCACctcaggagggtgaagagtgAGAGTTTGAAACTACAAATACTACTTCTACTGTTCTAGCCAAACAGAAACGCCCGTACTTAACTGGAATACGAGTGGATATTTTTTATAGAAACGGGATTTTcgatttttatataaaaaactgtGGTAGTTATAAGATTTTATGTGATATAATAGAAAATGTGTAGTCACTGCACTAGCACTCACAACTTGctatttattttctctgtgtAAAGACCATGTTGTAGTTTAAatttctacattttattatgaagaaaaacatatttctgttcaaatgatttttaataaatgttttttttctctgta

Function

NR:

description
transmembrane gamma-carboxyglutamic acid protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251061.2 True 1151 mRNA 0.44 7 15174397 15182700

Neighbor

gene id symbol gene type direction distance location
prr12 prr12,prr12b,LOC107729421,LOC107658420,LOC107689691,LOC107730729,LOC107554076 coding downstream 1965 15136544 ~ 15172432 (-)
LOC103041971 LOC103041971 coding downstream 58926 15113469 ~ 15115471 (-)
scaf1 scaf1,LOC107658492,LOC107583012,LOC106583916 coding downstream 61743 15099039 ~ 15112654 (-)
LOC103041664 LOC108427365 coding downstream 87184 15046467 ~ 15087213 (-)
LOC103044148 LOC108280579,LOC108427364,LOC100007086 coding downstream 135340 15029186 ~ 15039057 (-)
rras rras,LOC107730736,LOC107658490,LOC107583016,LOC107554112 coding upstream 12163 15194863 ~ 15208007 (-)
LOC103047588 LOC107579758 coding upstream 37059 15219759 ~ 15225519 (-)
ap2a1 ap2a1,LOC103373570,LOC104937940,LOC103131521 coding upstream 46219 15228919 ~ 15269805 (-)
LOC103027827 syt5a,LOC108427381,LOC107658481,LOC107583026,LOC107730742,LOC107548337 coding upstream 465584 15648284 ~ 15665371 (-)
LOC103029400 LOC108427383,LOC108427382,LOC100528069,LOC108427385 coding upstream 489056 15671756 ~ 15673621 (-)
LOC111194139 NA non-coding downstream 85269 15087871 ~ 15089128 (-)
G10782 polr3d non-coding downstream 154282 15019291 ~ 15020115 (-)
G10654 NA non-coding downstream 402779 14771330 ~ 14771618 (-)
G10649 NA non-coding downstream 465784 14707333 ~ 14708613 (-)
G10595 NA non-coding downstream 479503 14692782 ~ 14694894 (-)
G10811 NA non-coding upstream 96753 15279453 ~ 15279928 (-)
G10962 NA non-coding upstream 486175 15668875 ~ 15689205 (-)
G10989 NA non-coding upstream 707373 15890073 ~ 15890647 (-)
G10996 NA non-coding upstream 760657 15943357 ~ 15943893 (-)
G11000 NA non-coding upstream 768234 15950934 ~ 15951171 (-)
LOC103043825 pax10,LOC108427317,LOC107689663,LOC108280587,LOC107557340,LOC107579793 other downstream 192828 14960832 ~ 14981569 (-)
G10767 NA other downstream 250438 14922965 ~ 14923959 (-)
LOC103040656 LOC108427315 other downstream 376754 14788070 ~ 14797643 (-)
hsd3b7 hsd3b7,LOC106601563 other downstream 517836 14619376 ~ 14656561 (-)
G10560 NA other downstream 930603 14241061 ~ 14243794 (-)
G10808 prmt1,LOC107729532,LOC107658485,LOC107689671 other upstream 90055 15272755 ~ 15278437 (-)
LOC111188178 NA other upstream 102976 15285676 ~ 15286735 (-)
LOC103030038 kcnc3a,LOC108427388,LOC107729449,LOC107693499,LOC107548332 other upstream 576056 15758756 ~ 15902433 (-)
strada strada,LOC107693497,LOC107658471 other upstream 796537 15979237 ~ 16004719 (-)
LOC103036671 LOC108427400 other upstream 1138878 16321578 ~ 16353834 (-)

Expression


Co-expression Network