CI01000009_09866875_09870401


Basic Information

Item Value
gene id CI01000009_09866875_09870401
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 9866565 ~ 9870464 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_09866875_09870401.mRNA
AGAGGCTCGGTGAGAGATGTTAGAGGAGCTTCGGTGATCATAGTGCTTAGTCAGGGCCTGGAAATGCAGCGTTTCGCACCTGAGAATCTCAGGCGCTTCAGTTGGAACGGGTGGAAAAACCTCCTGCTGCCGCAATTGAACAGACGCTCGCTGTTTGTCTACGGCAGTGAGGTGGCGGTAGAGAAGGAGTGTATTAGACAGAAAGAGGGAGGCGTAATTGTCATCCATCCCTTCAGTCGTATAAGGAGTTACTACATCATGTGTATGATGGCCATAACATTTCTGAATCTAATTGGGATCCCAATGGAGATTGCCTTTCTAGATGGGAACAGTGGAGTAGGTTGGGAGGGTTTTAACGTGTTCTCGGACACTCTGTTCCTGATTGACGTTGGGCTTAACTTTCGCATGGGGATCATTACTGAGGACAGCGAGGGAGCCATTATGGATTTGAAAAGCATTCGACAACGGTATTTAAAGAGCTGGTTTATACCTGATATGGTGGCAGCATTCCCAGTTGGTTATATCCTGCTTATTGCGGACCTACAATACCACAGTGATACTCCCTCATCCAGAGCCAGCAAAATGATGCGCATCTTAATGTTTGTGAGAATCCTCAGTCTTGTCCGCCTGCTGCGTGTGTCAAGGCTTGTTAGGTTTTTCAATGAGGTGGAGAGAGTTTCAAATGCCAACTTGGAGGTGGTGAGGGTATTCCTAAGAATCTTGTCATTATTTATGATGATTTTCCTGCTGTGCCACTGGAATGGCTGTATTCAGTATTTCGTACCAATGCTTGAGGAATTTCCCTCAGACTGCTGGGTTAGAAGAGAGAATCTAATGAATGCCACAGTGGGAGAGAAGTACTCCTTTGGAGTTTTTCGGGCCCTCTCTCATATGACTGCAATATCATATGATGATGTTGAGCTGTGGATTGTCATGACTAGCATCGTGTCTGGAGCCATCATGTACACAGTGATGGTTGCTAACACTGCTGCAATGATGTCTGATGTGGACATAACAGCAAGAGCGTACAAGAACAAGATAAATCATCTGGAAGATTATATGACTTTCATGAAGCTTCCCAAAGCCCTTCGTATGCGCATCAACAACTACTATCAAGCTCGTTATGCTGGGAAATGGTATGATGAGAAGGATGTCCTGAAGTGGGTGTCCTCATCTTTAAGAGAGGAAATTCTGCTGACCATGTGCTCTGCCCATGTGAGAAAAGTTCCCATTTTCCGGAACTGTGACATAAACTTCATCAATGCCATTCTTCTGGAGCTGCAGTATGAGGTCTTCCAGGCAGGTGACATCATCTTCCAGCAGAACGCTCCTGGTGACCGCATGTTCTTCATCGAGCACGGCCAGGTCCTTGTGGAGAATGAGTTTGTCCAGAAAGAACTGTGTGATGGAGACTACTTTGGAGACTCGTGTCTCCTAACAAGAGGAAAGCGCTTGGCCACAGTACAAGCCGTGACTGTCTGTCAGCTCTTTTCCTTGTCAGTGGACACCTTTCATTGTGTTCTGGAGGACTATCCAGACATCAAGAGAGACCTGGAGACATCTCAACAGGATAAAGACATTTTGTTATGTTGAGAAAGTAAGTTAGTTTTAGTGCTATCAATGCTTAATATTTTTATAGCAAGCGTGATGCATTTTTCCAAGATCCTTGATGAATTGAATATTCCAAAGAACAGCATTTAAATCTTTTGTAACATTATAAATGTCTTTACTGTCACTTTTGATCAATTTAATGCATTCTTGCTGAATAAAAGTATTAATTTCTTTTAAAAAAAATGTATATGCACTACCAAAATGATGTTATGTAAGTTAGCAATTTAAAAAAAATATATATATTATTATTAGTAATACAACACATTAACCAATGTTGAAAAGCGGAATTAAA

Function

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0042391 regulation of membrane potential biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_09866875_09870401.mRNA True 1903 mRNA 0.43 10 9866565 9870464

Neighbor

gene id symbol gene type direction distance location
CI01000009_09855740_09859027 NA coding downstream 7538 9855740 ~ 9859027 (-)
CI01000009_09851362_09853119 NA coding downstream 13446 9849992 ~ 9853119 (-)
CI01000009_09836011_09846297 LATS2 coding downstream 17935 9834751 ~ 9848630 (-)
CI01000009_09817498_09826525 NA coding downstream 40040 9817247 ~ 9826525 (-)
CI01000009_09792753_09812884 XPO4 coding downstream 53231 9792049 ~ 9813334 (-)
CI01000009_09884586_09891558 PLA1A coding upstream 14116 9884580 ~ 9891558 (-)
CI01000009_09895304_09897877 HSD3B1 coding upstream 24692 9895156 ~ 9898004 (-)
CI01000009_09900049_09906784 KLH13 coding upstream 29245 9899709 ~ 9906784 (-)
CI01000009_09908895_09911939 HAO2, HAOX2 coding upstream 38119 9908583 ~ 9912038 (-)
CI01000009_10089124_10102162 WDR3 coding upstream 217473 10087937 ~ 10102162 (-)
G57180 NA non-coding downstream 94057 9771719 ~ 9772508 (-)
G57179 NA non-coding downstream 97433 9766774 ~ 9769132 (-)
G57176 NA non-coding downstream 112456 9753748 ~ 9754109 (-)
G57114 NA non-coding downstream 296906 9557639 ~ 9569659 (-)
G57111 NA non-coding downstream 378026 9488318 ~ 9488539 (-)
G57042 NA non-coding upstream 2874 9873338 ~ 9875717 (-)
G57189 NA non-coding upstream 44724 9915188 ~ 9915459 (-)
G57210 NA non-coding upstream 93866 9964330 ~ 9964556 (-)
G57219 NA non-coding upstream 115609 9986073 ~ 9986491 (-)
CI01000009_08858198_08860555 NA other downstream 1006002 8856310 ~ 8860563 (-)
G55814 NA other downstream 1438553 8425821 ~ 8428012 (-)
G53515 NA other downstream 4361317 5502395 ~ 5505248 (-)
G52828 NA other downstream 5635096 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 6604608 3261038 ~ 3262843 (-)
G59097 NA other upstream 2417753 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 4104924 13975099 ~ 13978614 (-)
G59490 NA other upstream 4163100 14033564 ~ 14037873 (-)
G59811 NA other upstream 4991933 14862397 ~ 14887464 (-)
G59941 NA other upstream 5261640 15132104 ~ 15132503 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location