nudt6 (nudt6,LOC107690594)


Basic Information

Item Value
gene id nudt6
gene name nudt6,LOC107690594
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 33092865 ~ 33101606 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007260311.3
ATGGCGGTGTTCGGCTCAGCTCTGCGGCGCTCGCTCCTAACCCTGCCCGCACAGGGCGCCCGCAGCACGGCCTCTCTACAGTGGCTCCGCCGCCTCTCCGCAGGCCCAGATGCGGAGCCTCGGACTGTCAGTGCTCTGCTGCCCGGGGTAACGGACCGCTTCGGCGGCGTGACTGTCCGGCATCTGCCCCCTCAGATCAGCGAGTCCGCATTTAGCTCCATGCTGAGAGactctctctctcagtggcgTTCTGATGGGAGGATAGCGGTATGGCTGTATGTACCGTTGGCTCAGTGCCGGTTGGCGGAGGCTGCAGCGCTGCACGGCTTCACCTTCCACCACGCGCTCGGGGCCACGGCGGTGCTCAGCCTGTGGATGGGGCCCGGAGAGAGCCGGCTGCCCGGATACGCCACGCACCAGGTCGGGGTGGCAGGTGCCGTTGTAAACGAGTCCAATGCGAAGGTTCTGGTCGTGCAAGACAAGAACAAGACTAAGAACGCGTGGAAGTTCCCGGGAGGCCTGTCGGAGCCGGGAGAGAATATCGGAGACACTGCTGTGCGCGAGGTCTTCGAGGAAACCGGCGTCCGATCGGAATTCCGATCTCTCCTGAGCATCCGGCAGCAGCACAACCACCCCGGAGCGTTCGGAATGTCGGACATGTATCTGATCTGCCGGCTCCGCCCCCTGACCTACGACATCAGCTTCTGTATGCAGGAGTGTCTGCGCTGCGAGTGGCTGGATCTGTCCGAACTGGCTAAAACCGAGGAAACCACGCCCATAACGAGCCGCATCGCCAAACTGCTGCTGTACGGCCTGGAGAACGGCTTCCACAACATCGACCTCGGCGTGGAGGAGGTTCCCGCCGTCTACACCGGCCTGTTCTATCAGCTCTACCACAGACACATTCCAGAGGAGCATCCGAAATAATAAACACTGGTGATACAGTAGAGGAACAACGGTGCTCAGAGGACGTTACAAAGGTCTGATTTGGGAATGTGATCGTGTGCTGGAAACTGGATATTTAGGATGCTGTGTGAGGATATTTTAAAGCTGACAGTTACATTTTTAGCGaacataatatactgtattttacacacTATAGGTCACACTTAAAATgacttaattttcccaaaaatcgtcagttcTCTttgtgtataaattttaccagtcaggtattaaggagcagtaaagtcactccactgaagtagagagttatacaggagtttcagtttagctttagccgctaaccgttGTTTCCtaggtctgtagcctgctgctgtttaccccagctagcactgctggagcagcattagctttttcGACGCTCAAAGGTTAGTATATCgacgctgtccaatgaaaaacacttatctccaaaaaagcaactttacaggaaagagaaaaaacattgcaaactttcagtg

Function

symbol description
nudt6 Predicted to enable ADP-ribose diphosphatase activity; NAD binding activity; and NADH pyrophosphatase activity. Orthologous to human NUDT6 (nudix hydrolase 6).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007260311.3 True 1421 mRNA 0.54 5 33092865 33101606

Neighbor

gene id symbol gene type direction distance location
kiaa0141 NA coding downstream 8689 33075133 ~ 33084176 (-)
LOC103027351 LOC108434533,LOC105893001 coding downstream 19484 33035849 ~ 33073381 (-)
LOC103028197 NA coding downstream 133025 32956131 ~ 32959840 (-)
LOC103029347 NA coding downstream 149272 32921025 ~ 32943593 (-)
LOC103029668 NA coding downstream 227528 32860683 ~ 32865337 (-)
ankrd50 ankrd50 coding upstream 199627 33301233 ~ 33348173 (-)
LOC103022214 NA coding upstream 797252 33898858 ~ 33909077 (-)
LOC103031787 drd5,LOC107701828 coding upstream 937803 34039409 ~ 34041114 (-)
otop1 otop1 coding upstream 942905 34044511 ~ 34055572 (-)
tmem128 tmem128 coding upstream 956192 34057798 ~ 34065048 (-)
G15290 NA non-coding downstream 26302 33033170 ~ 33066563 (-)
G15303 NA non-coding downstream 52470 33019112 ~ 33040395 (-)
G15300 NA non-coding downstream 68929 33013370 ~ 33023936 (-)
G15302 NA non-coding downstream 74313 33016265 ~ 33018552 (-)
G15289 NA non-coding downstream 109505 32971537 ~ 32983360 (-)
G15319 NA non-coding upstream 28362 33129968 ~ 33130342 (-)
G15329 NA non-coding upstream 114802 33216408 ~ 33216763 (-)
G15330 NA non-coding upstream 117593 33219199 ~ 33219418 (-)
G15343 NA non-coding upstream 197056 33298662 ~ 33299321 (-)
G15363 NA non-coding upstream 399160 33500766 ~ 33501000 (-)
hopx hopx,LOC107552340 other downstream 272061 32814048 ~ 32820804 (-)
nfkb1 nfkb1,LOC106536450 other downstream 932902 32122222 ~ 32159963 (-)
G14839 NA other downstream 2037362 31053764 ~ 31055503 (-)
trnap-agg_1 NA other downstream 2168778 30923812 ~ 30924087 (-)
G14781 LOC107602351 other downstream 2169616 30914910 ~ 30923249 (-)
G15497 NA other upstream 1032986 34134592 ~ 34136732 (-)
evc2 NA other upstream 1050217 34151823 ~ 34172017 (-)
G15498 NA other upstream 1139720 34241326 ~ 34242318 (-)

Expression


Co-expression Network