LOC103029565 (LOC103029565)


Basic Information

Item Value
gene id LOC103029565
gene name LOC103029565
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 116081 ~ 152225 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007260747.2
aggatcCAGAGCTAACTCTCTAAACTCCTCCCCTCTCATAAAGTTACACtgtgtagagaaagagagagagagaaagaaagggagagagagagaggtaaagaggtgGTCACGTGACTCACCGGTAACTCCAGCAGCAGGTAAAGGTGAGTCTCCGGGTTTGTACTGTATCCCTCTCTCCGCTGCGCGAGCACACCGAGCGCCGCGATGGCCGAGTCCCAGCTCACCTGTCTGGACGACGAGCACGTGAACGCCAAGATCCCGGAGTCCCGGCCCGAGTTCTACTACAGCGAGGAGCAGCGCGCGGCCCTGGAGCAGCTCCTCCGGAACGGGGACGGAGCCTTCAAGATGCGACTCAAAGAGGACAACGTCAAGGACTTCCTCTCGGCGCGCGAGGTCCGCTGGATCCGGGACACGTTCCGGGAGTACGACGCCGACGGAGAGTCGGAGCCCTGCGGCTCTCACGCGCCCAGAGACCCGAGCGCAGACTCGGGGGTCCACTCCACCTACTGGCCCACCATGTCCGACACCGAGGTCCCGCCGCTGGACATCGGCTGGCCGAGCGGGGGCTTCTACCGGGGGGTCACGCGGGTGTCGGTGTACTCGCATCCCCCCAAAGAAAACGGGCCTCATATCAAGGAGGTGGTCCGGAAACTCATACAGGAGTCAACCAAGgTGGTGGCAGTGGTTATGGACCTCCTGACTGACCTGCTGATTCTGCAGGACCTGCTGGATGCGGGCAGTAAGCGTGGCGTGGCTGTTTACCTGCTGCTGGAGGAACAAGGCCTGCCGCACTTCCTGGACATGTGCAGCCGCCTGCAGATATCCGCCCAGCACCTACGGAATCTGCGGGTGCGGACCGTGAGGGGCTCTGGTCTGGCTTTGTCCTTTGGCAAACTCCCAGGATCCATGTGTTCTAAGTACATGCTGGTTGATGGAGAAAAGGTCATGTTTGGCTCATACAgCTTTACATGGACCTCCTCCCGGATGAACCGCAACACTGTAACAGTCATGACTGGCCAGATCGTGGACTTCTTCGACAATGACTTCAGAGAGCTGTACGCAGTGTCTGATAAGGTGGACCTGTACCAGGAGTTCCACATCACTAAACCCCCAATGGCTGCTCCAGTCATAAAAACCCCGGCTGCTCCCAGCCAACCGACAGTGCCCGTGACCAGCTCCCGCTTCCAGGTCTCTCTGGAAGACTCCAAACACGTCAACCTAAAGGTTCCTGCACACAAGTACCACAATCCCAAGTATGCCCTTGTGGTGGGCAACAGTCTTGGGATCACTGGATCTTTGCAAGACCTCACCAAGCTCAAGGACTATGCTGGACAAAACAATATAGAGAAATTACTCCACACCAGCGGGGGCAGTGCTGAGCATGCAGACTCCAAGCCTCCACAGACCCCCGCATCTCTGAAAGACACAGATGAGAATAAGGGAGATGTAGCGAATCCTTTGCTGTTCGGTTTAAAAAAGCAACGCAGCTCTTTCCGGCTTTTCCTTAAAGGCAGGTCGCCCAATCACAGTCCAGAGTTAAGGACAGCAAACCAAAGCACTAATTCTAAAACCACCAATCACAGGAAAGACTTTGGCAAGAATGTGGACAGTCAATCTAAAGAGGCGAGTTATTCTAAAGAAGCTCAGCAGAAGATTGCTAATAATGCTAAGGAAGTGCCTTCAAGGATGTCTAATAATTCCAAAGAAGTGCCTTCAAAGATTGCTAATCATGCTAAGGAAGTGACTCCAATTATCACTACCCATACTACAGATGTAGCTCCAAAGATTACTAACCATGCTAAGGATGTAGCTCCAAAGATTCCCATCCATGCTAAGGATATAGCTTCAAAGatcactaaccacgctaaagAAGTGGCTCCAAGTGTTCCTAACCATGCTAAGGAAGTATCTCCAAACTTCACGAAGCATACAAAAGAAGTGACTCCAAAGaatgctaaccatgctaaggaAGTAGCTCCAAACATCAATAACAATGCTACAGAGGTGGCTCCACACATGGCTAACCATGCTAAGGAAGTGGCATTAAAAGTCAATAATCATGGTAGAGAACAACCATCTGCGGACACGTCCAAAACCATGCAGCCTCCCTTGGCCTTAACTGAAGTCTCAGAGACCGACAGCATCGCCGAACTGGACGACACGTTTGTGATTATAGAAAAACCAAACCTGctgaaatttaaaaacagaaagtCCTCCAAACTAGGTCCAAGAAGCATGTCCTTGCAGACCATCGGCGCAGTAGAAGACGatgGCTCAAGAGGGCGAAGGCGGAATCAGAAGAAGACCTGCATTCAGTCGTGAGATGAGTGAACAAACCCCCGGTAGAAAGCAATAAAATGAAGAGTTATTGGATCTTCAGAGAATTCGATGCTAGGTCAGCTTGGACGTGGACAAAAAAGCAGCCTAAGAACTACAGAAACCAGAGTGAACGCAACCAGAGCACAGTGTTTTTCACAGAGTTAGTGATTTCTCTTCCAAAATGTCTTCTGTCCCCTTCAGTATATAAGTCAGAGCGCTCACTTAAGCATGCCTGTAATATGAAATGTGAAGGATGAAATGTCAAGAGGGTTGGAAGTCATGTGGAACGAAGAAGCTCCCTGCAGAACATCTGCAAAGTTCATGTCATAGCGTGGCGTTCATATGTGAATCATGTCATGTGATGTCTCAGAGTCATAaccttatataataatattaataatgaaagaaaaaaaacacagcaaatccagctgttttttttttttaaagcaaatgtgGCAGAAATGTTTCCCCCCTGGATCTTCACGCCAGTGACATTCACAAGACCACAGTTCCCAGAATCCATGTGTCCATGTGAATCCAGTAGAGTGTAGTGACACAAAGCACAAGTCAAAGcacaatgcacaattttttgTTTCATATCTTATGGTTTTTAAGTATAAAGCTTAAAAGCTGCCATACATACTTCAATctgcattttgtatattttaatacaatttacttGACTTTTAATAGACAAAAAAACGCACCAGATTACAAGGCGCACTATTTTTCACTATTttcattataaggtgcattatacaacactagtaaggaacaggggtgtcacctgTTTTAAtcctaaaaaaactgtttatt

Function

NR:

description
protein FAM83G-like

GO: NA

KEGG:

id description
K23930 FAM83; protein FAM83

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007260747.2 True 3135 mRNA 0.48 5 116081 152225

Neighbor

gene id symbol gene type direction distance location
LOC103029038 NA coding upstream 5419 51288 ~ 110662 (+)
LOC111193007 rac2,LOC108436672,LOC107561353,LOC105892187,LOC107551172,LOC108231305,LOC106601467 coding downstream 48738 200963 ~ 273632 (+)
LOC103034757 LOC108436653 coding downstream 162623 314848 ~ 365716 (+)
LOC103047457 NA coding downstream 248745 400970 ~ 407136 (+)
LOC111193013 NA coding downstream 362055 514280 ~ 528000 (+)
trnal-uag NA coding downstream 380546 532771 ~ 532853 (+)
G6851 NA non-coding downstream 35910 188135 ~ 198964 (+)
G6852 NA non-coding downstream 44395 196620 ~ 196914 (+)
G6876 NA non-coding downstream 47172 199397 ~ 199780 (+)
G6895 NA non-coding downstream 228379 380604 ~ 380940 (+)
G6928 NA non-coding downstream 392209 544434 ~ 574624 (+)
G6901 LOC108436678 other downstream 260906 413131 ~ 437388 (+)
G6995 NA other downstream 548539 700764 ~ 702320 (+)
G7109 NA other downstream 1187981 1340206 ~ 1345431 (+)
LOC103037883 LOC105898698,LOC103360086,LOC101074561,LOC107391594,LOC102794576,LOC103154361,LOC100701095,LOC105938735,LOC105901802 other downstream 1887162 2039387 ~ 2047563 (+)
carm1 carm1 other downstream 1898058 2050283 ~ 2080541 (+)

Expression


Co-expression Network