kat2a (kat2a,LOC107755568,LOC107690294,LOC107687008)


Basic Information

Item Value
gene id kat2a
gene name kat2a,LOC107755568,LOC107690294,LOC107687008
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 5452252 ~ 5467730 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015607612.2
GTAAGGGCTGTGTCTCATGGACACAGGCGGCAGCGAGGCCTGACAAaacgtaaataaataaacagaatttcCTGTTCCAGAGCGCTTTAAGCTACCAGAACTGAACACAGCGATTCTCCGGACCGGGGCGCACCGTGCTGGTATGGCGGAACCGGCGGCACAAGCCTCCACGCAAGCCCGGCTTCAGCAGGGCCCGAGCGGGGGCTCTGCGAGCTCCGGCCCGAACACAGGCTCCGGCTCCGGGAGCAGCGACCCGGCGCGGCCCGGCCTGAGCCAGCAGCAGTGGGCGAGCCAGAAAAAAGCCCAGGTCCGCGCCTTTCCTCGGGCTAAGAAGCTGGAGAAACTCGGCGTGTTCTCGGCTTGCAAGGCAAATGATTCCTGTAAGTGTAATGGCTGGAAGAACCCTCATCCTCCCACGGCCACCCGGATGGAGCTTCAGCAGCAGACGGCCAACCTGAGCGAGGCGTGCCGGAGCTGTGGCCACGCCCTGGcGGAGCATGTATCCCATCTGGAAAACGTGTCGGAGGAAGAAATAAACAGGTTACTGGGGATGGTGGTGGACGTAGAGAATCTGTTCATGTCTGTACATAAAGAGGAGGACACAGACACCAAGCAGGTTTACTTCTACCTGTTTAAGCTGTTGAGGAAATGCATTCTGCAGATGGGAAAGCCAGTAGTTGAGGGCTCACTTGGAAGCCCACCGTTTGAGAAACCCAACATAGAACAGggggTTTTGAACTTTGTGCAGTATAAATTCAGTCACTTGGCTCCTAAAGAAAGGCAGACGATGTACGAGCTGAGTAAGATGTTCCTGCTGTGTCTGAATTACTGGAAACTAGAAACTCCATCACAGTTCCGCCAGCGAGCCCAGAAAGAGGACGCCTCTGCATACAAAGTAGACTATACTAGgtgGCTGTGCTACTGTCACGTCCCACAGAGCAATGACAGTTTGCCCCGCTATGAGACGTGTCAGGTGTTCGGCCGCAGCCTCCTCAAGTCCATCTTCACGGTCACCCGCAGGCAGCTGCTGGAGAAGTTCCGGGTGGAGAAAGACAAACTTCCTCCGGAGAAACGGACTCTCATTTTAACACACTTTCCCAAgttTCTTTCCATGCTAGAAGAAGAGATCTATGGAGAAAACTCTCCTATCTGGGACGCAGACTTCACCATGCCAGCCTCAGAGGGGGCACAGCTGGTGCCTCAGACAGTGCTGAGCCCCGTGGCAGTGTCGGGCTCTCCTCTACGGAAAGGCCAAGCAGGCTCTGCTCTGGACACGGTCGTCTCTGAACCCATCACAGgagagaagagaaagctGCCGGAAGCGTTAACGCTGGAAGATGCTAAAAGGATCAGGGTGATGGGGGATATTCCCATGGAGCTGGTCAACGAGGTCATGATGACTATAACTGACCCTGCTGCCATGTTGGGCCCGGAGACGAGTCTCCTCTCTGCTAATGCGGCTCGGGACGAaacagcacgcttggaggaaaggcGTGGCATTATAGAGTTCCATGTGATTGGCAACTCACTGTCTCAGAAGTCTAATAAGAAGATCCTGATGTGGCTGGTGGGGCTACAGAACGTTTTCTCTCACCAGCTGCCACGCATGCCCAAAGAATACATCACGCGTCTAGTCTTTGATCCGAAGCACAAGACATTGGCTCTGATAAAAGATGGCCGTGTTATTGGAGGGATCTGCTTCCGAATGTTTCCAACTCAGGGCTTCACTGAGATTGTCTTCTGTGCTGTTACATCAAACGAGCAAGTCAAGgGCTATGGCACACATTTGATGAATCACCTGAAGGAATATCACATCAAACATGGCATACTTTACTTCCTCACCTATGCTGATGAGTATGCAATTGGCTACTTCAAGAAGCAGGGCTTCTCGAAAGACATCAAAGTGCCAAAGAGTCGCTACCTTGGCTACATTAAAGATTATGAAGGGGCTACATTGATGGAGTGTGAGCTGAATCCCAGAATTCCCTACACAGAGCTGTCGCACATCAtcaagagacagaaagaaatcATTAAGAAGCTGATTGAGAGGAAACAGAGTCAGATCAGGAAAGTGTACCCTGGCCTCACCTGCTTCAAAGAAGGAGTCCGACAGATACCTGTGGAGAGCATACCTGGAAtaaGGGAGACGGGTTGGAAACCCAGTGCCAAAGAGAAAAAtaaagAACTGAAAGATCCTGATCTACTGTACAACATACTGAAGAATCTCCTGGCCCAGATTAAAACACACCCAGATGCTTGGCCTTTTATGGAACCAGTGAAGAAGTCTGAAGCTCCTGATTACTATGAGATCATCCGGTTTCCGATTGACCTCAAGACTATGACGGAGCGGCTGAAGAACCGCTACTACGTGACTAAGAAGCTGTTCATCGCTGACCTGCAGAGAGTGATCACAAACTGCAGAGAGTACAACCCACCTGACAGCGAATACTGCAAATGTGCCAACACACTGGAGAAGTTCTTCTATTTCAAACTCAAGGAGAGCGGCCTCATCGACAAGTGAAGGCGAATGCCTGGAGGGTGAGGGACCAGGGAGAGGTGCAGGATGAGATGCAGAAAAAGattattactttacattacattacagtactgtACAATAGTCTTGGGCAATCTGCTAAAATTCATTCAAGATTTAAAGCTTTGTATCTCAAGCATCTTTGTTACACATTCAATTAAGATGTTCCCATATTAGGATCTTCTAGAAGGAGTCAAGTATCCAGTACCTGGTTCAgcaaatccaaaaacattacTTGAAGAACTTAAATCAGGTTTGGTGATGAAAGGTTGGTTGTCCTTGACtttacacagtactgtattttggTCTTAAGATATGCAACCATGAGAAAGAGAAGAGCCATGAGCCAATGGGCAATTAGAGTGGTCAAGGAAATATGATTGTTTTGGGCTGCAGTGTTGGATAGTTAGGTgcttttaaactgtataaaGGAGCCTTTCTGAAATGACTATTGTTTGCTTTCTGTTTTCCTTCTTCTCCATCTACATGATGTTGAGAGATCATGACTCATGTTTACTGAGGGTCATTTGTAGCAATAGATGTTCTTACTCATAACACAACGTGCACAGTGTTGGACTACAGAACCTGTTTCCAGAGAACTAGCTCTATATAATGTCATATGCTGTGTGAAAAACATCCGATTCACAGTTACAAGAAGGTTTACCAGCTGGGCtcaattactgtattttgtcCCCACAGAGCCAAAAATGGAGCACTGGGGCCCTCCAGTGGCCTGATCTGCTAAGGTTAAGAGAGTAATTTGGTGGAAAATTGAATGGAACTGAAGTTTTgctgtatattaatgtatttccTATACATGTTTCTATACAATGACTGGGCTGTACACGCTGTGGCAGagtggtttggtgtgaaatggttCGTAGTACGAAAATTTTGGAATTGCAATTTTATTTTGcaatctttaaaaatgtattagagAACCTACACACGTATTTATGCATAAGGTCTTATTTTATGATAATACTGGTAAATAGTGATCAATCTAATTTTGCTTACTTTGGGGACCGTTTTGCCTTAAAATGCAAAGGGCAATTCAAATTGCCAACTTTGCAAAAGAAGGACAAACATTCTTAAATTGAGGTCTgtgtcattttgaaataattctATTGGTCAAATTATCAATAAATTTTGTTAAAACATCTAGAGCAGTGGCTAGATTTAAATTATGTCAAaaggtcaaaataaaaaaaatctgatttaaggtTTTGGCACAACTGCAACAATGTGTGTTTACAATACATGCATTTTTGAAATGTAAAACTACTGATCAATCACTACAAATCAATTCTTAAGCATTAGGCAGCATATTTGTAACGTTTAATTACAACTACAGTCAAATGTGTATCTTGTTAAAGCATACATTACCTCAGACATCCAGCTATAACTGCTTATTACTGCCTAAGCTGAGCATTTTACATCAGACCACTGTAAATGACAAATATTTAATGCTGCAgaaatttaattgaaaaaactgatttaaacaaTTCCCAAATTTCTATTTAGGTAATCAGCCAAGTCATGTCTTATATCTAAACTTTGCACTAGAGCTAAAAATTTGCTAGCAAATATCATAGAAGCTTACAGGTTAAAAACAGTTCAGCATTGTTTAAATTGTATGTCTAAAACCTTGCCCATTTGCCTCAAACTGCATTTAGTTGATGAATAATCTCCTACAGATATGTTTAAGTGGTTTCTAATGCTGTTATAACATGCAAAAACGTTTAAGAAGGTCAAATGAACAAAgattagcaacattagcatgtTAACTTCAGTGCCTTCTGTAAAGAAGCAAACATGTCTTgtctgaggtaaaaaaaaaaaaatactggataCTTCGTTTTTTCTCGCTAAGCTGTTGCTTAAAGTCATTGTAACACAGTATCTTTCCCTTAAATTTAGACCTAAATTCTGGTATTAGCCTGCTAATTGCGAAGCAGTGAAATTGAGAAGATGGAAATTAGCATTGTTTAAACTGTATGTCTAAAACTTTCCCTGTTTTCCTCAAACTGCTTTTAGTTGATGAATAATCTCCTACAgaattttttaagtggtttcatATGCTGTTATAACATgctaaaacttttaaaaaggtCAAATGGACACAgtttagcaacattagcattttagctcCAGTGCCTTCACTAATGAAGCAAACATGTCTTgtctgaggtaaaaaaaaaaaaaatactactaataataatggatACTTCATTTTTCTCAATAAGGTGTTGCTTAAAACCATTGTAACACATTATCTTTCTCCTAAACTCGGACCTACCTACTGGTGTTAGCCTGCTAATTGCGTAGCAGTGAAGTTGAGAAGATGAACATTAGCCTTGTTTAAACTGCATAAGTGtttttagcaacattagcattttagctcCAGTGCCTTCACTGAAGAAGCAAACATGTCTTgtctgaggtaaaaaaaaaaataaataaaattaatactaataatactggATACATTGTTCTTCTAACTAGGCTGTTGCTTAAAATCGCTGTAACACAGTATCTTTCCCCTAAACTCGGACCTAAGCTCTGGTGTTAGCCTGCTTATTGCGTAGCATTGAAGTTGGAAGGATGAAATGTGATCTGAGCTGCTCAGAAGCTAAAATGACTGAAAGGTTTTCTCCTTGAGGAAGGACATGAGGCCAGTTTGTTTGGAGTGGATAGTGTGCTGTCAGTCTTGCAGTATTAGTTTCTGGGGTCGTATTCAGGTTTCAGGATGTGAAACATCAGGTTTCAAGCATTCCTACATTAGTCATTCCATTAGCCATTAGCTATTAGCGGTCACAAACTACCGGTGCTTTTGTGTGTGGGGAGTGTAGGGAGGGACTGGGCTGCTTGCTGGTTGTGATGATAGTAGCAGCACTGGGCATGTATGTATACTGCAGATATAAGCCATATTTGTCGTTATGATGGTTTCTTGGTGCTTCGAACTTCATGGTGTCATGCCAAACTTCACTGAAACAGCAGCCgtttcaatttaaaaaacattatttggccaaaagtttgtggacacctaCTTATCTTgtgaatctttaaaaaaataaaaataaatacagggtATCAAAAATGAGTGTCTTTACTTTTGCTGAAGTAACAGCACATCCACTCTGCATATCTACTAGCTGGATATATTATTATAGAGGACGCTTTTCACAAGACTTTGGTGTGAGGGTTTGATTGCACACAGCCACAAGATCACAATTTGTGCTCACAAATTTGTGTCACTGTTTTTCTGCTTCACATTCTGAAGTCACAGTGACCAAACCATCCTATTCTGTTAGCAGCACTTTTGCAACCTCTGTTAGCACAACTATAGAAACACAGTTGATGCACTGAGGAGAATGGGTGTCCCACAAATCTTTAGACATTTAGTCAAGTCAGCTGTTTCTGCAGTTTGTGCCAGTTCTCGTTTCATAcagtatgcatttttataaaagttGTGCACATGGAAAATAATAACTAACagaacaatacaaaacaaaaaaaagtctacAAAAATTCTGTGTAATTTCACAAGCTGTAATCAAATATGGAATATATGGAATGGAATCTCTTTTAGCCTGATGTACTTCAATTTAATCACCATAAAAAAGGTTCTTAAACACATCACAAAGTACAAACTCTCACAAACAGTGCTGTATTTCCGTGTCTGTGCCTGTTCCGATGCTGCATGCTCACAGCAACTTTACTATTCACGTTTAGGAGGAATGTTAACGTTATCTGACgagttctgttttttcttttttatatatatataggtattctCCATTAAGCTGCTGCAAATGAATTGCTGCAGTTCTTTTCCACTCTAATCCGGTTCTTGTGTTGGTGATCTACTATCATCACCAATCATGACTAGTTCTGTGGCTGggtctttcttcttttttttttttttttttttagttgtacAGGCTTGTGTCGAGCGATAACGACGCATTGTGTTTCCCAAAGAATACAGGGAGGTGGCGTTTGTGGCTTTAGTTCCATATTGATGGTGCATGTAAATTGCTGCAGGTCTTTGTACTGTATTactgtttctgtttataaaagaaaaataaacattttttataaggTA

Function

symbol description
kat2a Predicted to enable N-acyltransferase activity; chromatin binding activity; and transcription coactivator activity. Involved in histone acetylation; regulation of bone development; and regulation of cartilage development. Acts upstream of or within bone morphogenesis; heart development; and limb development. Predicted to be located in centrosome and nucleus. Predicted to be part of histone acetyltransferase complex. Is expressed in brain; fin; head; heart; and otic vesicle. Orthologous to human KAT2A (lysine acetyltransferase 2A).

NR:

description
PREDICTED: histone acetyltransferase KAT2A-like isoform X1

GO: NA

KEGG:

id description
K06062 PCAF, KAT2, GCN5; histone acetyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015607612.2 True 6641 mRNA 0.42 18 5452252 5467730

Neighbor

gene id symbol gene type direction distance location
rab5c rab5c,LOC107690295,LOC104958098 coding upstream 2052 5422178 ~ 5450200 (+)
kcnh4 kcnh4,LOC107568301 coding upstream 44090 5342633 ~ 5408162 (+)
LOC103033010 sta5b,stat5,LOC108444239,LOC106607295,LOC108279147 coding upstream 369525 4919473 ~ 5082727 (+)
stat3 stat3,LOC107653351,LOC107731003,LOC107754129 coding upstream 544091 4854378 ~ 4908161 (+)
cavin1 NA coding upstream 615237 4806334 ~ 4837015 (+)
dhx58 NA coding downstream 7084 5474814 ~ 5500346 (+)
znf385c znf385c,LOC107590592 coding downstream 72211 5539941 ~ 5686852 (+)
dnajc7 dnajc7,LOC107690290,LOC107687006,LOC107755572 coding downstream 238478 5706208 ~ 5727621 (+)
LOC111193176 LOC108259092,LOC107687002 coding downstream 427427 5895157 ~ 5897909 (+)
nudt9 nudt9,LOC107690277,LOC107755585,LOC107729190,LOC107686995 coding downstream 577182 6044912 ~ 6052499 (+)
G8181 NA non-coding upstream 39844 5411840 ~ 5412408 (+)
LOC111193166 NA non-coding upstream 118258 5332883 ~ 5333994 (+)
G8157 NA non-coding upstream 299745 5146370 ~ 5152507 (+)
G8155 NA non-coding upstream 308897 5143000 ~ 5143355 (+)
G8141 NA non-coding upstream 327084 5118048 ~ 5125168 (+)
G8250 NA non-coding downstream 133892 5601622 ~ 5642847 (+)
G8263 nkiras2,kbrs2,LOC106607286 non-coding downstream 235635 5703365 ~ 5705039 (+)
G8291 NA non-coding downstream 437690 5905420 ~ 5905619 (+)
G8292 NA non-coding downstream 442540 5910270 ~ 5910650 (+)
G8304 NA non-coding downstream 483890 5951620 ~ 5958778 (+)
hcrt hcrt other upstream 113163 5332065 ~ 5339089 (+)
LOC103045997 si:ch211-210g13.5,LOC108441607,LOC107729192,LOC107687011,LOC108256246,LOC107755565 other upstream 123385 5185534 ~ 5328867 (+)
atp6v0a1 atp6v0a1,LOC108444241 other upstream 649751 4752796 ~ 4802501 (+)
natd1 natd1,LOC107745813,LOC107689058,LOC107661164 other upstream 1523010 3924285 ~ 3929242 (+)
G7593 LOC107551170,LOC107729520,LOC107687640,LOC108434904,LOC100304518 other upstream 1999586 3449221 ~ 3452666 (+)
G8287 ttc25,LOC106601019 other downstream 261192 5728922 ~ 5729500 (+)
nmt1 nmt1,LOC108432052,LOC102778525 other downstream 889672 6357402 ~ 6376704 (+)
LOC103045148 LOC108432039 other downstream 1241355 6709085 ~ 6734703 (+)
LOC103040872 snu13,LOC103040872,LOC101154660,LOC105910236,LOC107573053 other downstream 2971056 8438786 ~ 8441829 (+)
LOC103021541 slc25a17,LOC108412891,LOC107666095,LOC107548713,LOC107743042,LOC566378 other downstream 2996386 8464116 ~ 8485936 (+)

Expression


Co-expression Network