LOC103026748 (pyya,LOC108434917,LOC108276154,LOC107689636,LOC107583099,LOC107758485)


Basic Information

Item Value
gene id LOC103026748
gene name pyya,LOC108434917,LOC108276154,LOC107689636,LOC107583099,LOC107758485
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 3065275 ~ 3101997 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671994.1
GACGTATTGAAAGAGAAGCAGCTGAAGTTCCAGTAGCAGCAGAAGCTTCATCCAGTCCACctgttctcctcctctcctctcacaATGACGGTCATGCTGAAGTCGTGGACGGTCGTCGCCGCCCTGCTGCTGTGTGTACTCCTATACCTCGGCACCATCGTGGATGCGTATCCCCCAAAACCAGAAAACCCAGGAGACGATGCGCCCCCTGAAGAGCTGGCCAAGTACTACACCGCCCTGAGACACTACATCAACCTCATCACGAGACAAAGgtatGGGAAAAGGTCCACTCCAGAGGGAGTGATGGCAGACCTGCTATTTGGAGAAAGCAATGAGCACAACCAGCGGTCAAGATATGATGACTCGTTCACATGGTGATGGTCACCCCTTTCCACTCTGCTCTCCTGTGCCTCCACAGAAACCCTGCAGAAAACTTACATTTCAGCCGAAAGTCTCTCCAGCTGTCTCTCCACCTGTCTCTCCAGCTGTTCCTCATCCACACTGAGATCCTCCACTGTCTCTAACTCAAACTGTACATAATTTATTACTACACTTGGAATATTTGtgagaatatgtgtgtgtgtgtgtgtgtgtgcttcacTGTGTCTTACAGAGGATATATTCTTTTTGTTTGTACATATTTATGACTGTGATTAAAGATGTTACCTGATGACGTGCCATCTGAACTGCTGTGACAGCCAAAACATCAGCCTCAGATTAAATGAACAGTTCTGCAAAAA

Function

symbol description
pyya Enables type 2 neuropeptide Y receptor binding activity. Predicted to be involved in feeding behavior and neuropeptide signaling pathway. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including brain; digestive system; eye; heart; and immune system. Orthologous to several human genes including PYY (peptide YY).

NR:

description
PREDICTED: peptide YY-A-like

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process
GO:0005576 extracellular region cellular_component
GO:0031843 type 2 neuropeptide Y receptor binding molecular_function
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05232 NPY; neuropeptide Y

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671994.1 True 740 mRNA 0.48 4 3065275 3101997

Neighbor

gene id symbol gene type direction distance location
LOC103026461 LOC103026461 coding upstream 89907 2974013 ~ 2975368 (+)
LOC111193073 LOC108412732 coding upstream 146438 2903075 ~ 2918837 (+)
LOC111193070 NA coding upstream 162916 2887621 ~ 2902359 (+)
LOC111194262 NA coding upstream 569319 2495303 ~ 2495956 (+)
LOC111194261 NA coding upstream 570193 2492574 ~ 2495082 (+)
LOC107196972 mpp2a,LOC108434916,LOC108276091,LOC107737744,LOC107582977,LOC107758486,LOC106600860 coding downstream 4194 3106191 ~ 3136201 (+)
LOC103027967 LOC108434915 coding downstream 42490 3144487 ~ 3160693 (+)
LOC103029856 cacng2a,cacng2,LOC107680886,LOC107561356,LOC107687643,LOC107732897,LOC107729558,LOC108434911 coding downstream 197341 3299338 ~ 3423252 (+)
ifi35 NA coding downstream 471245 3573242 ~ 3587765 (+)
LOC111194267 LOC101882592,LOC106911506,LOC107698541,LOC107722802 coding downstream 526690 3628687 ~ 3644274 (+)
LOC111194151 NA non-coding upstream 45767 3019118 ~ 3019508 (+)
G7466 NA non-coding upstream 86836 2978240 ~ 2978439 (+)
G7465 NA non-coding upstream 87101 2977850 ~ 2978174 (+)
G7447 NA non-coding upstream 135737 2926321 ~ 2929538 (+)
G7448 NA non-coding upstream 136598 2927539 ~ 2928677 (+)
G7492 NA non-coding downstream 38084 3140081 ~ 3144378 (+)
G7518 NA non-coding downstream 61136 3163133 ~ 3171573 (+)
G7526 NA non-coding downstream 86317 3188314 ~ 3192875 (+)
G7531 NA non-coding downstream 157197 3259194 ~ 3263791 (+)
G7587 NA non-coding downstream 293598 3395595 ~ 3397290 (+)
LOC111193069 dlx4a,LOC108432421,LOC107688148,LOC107590410,LOC107689696,LOC107753083 other upstream 223061 2825128 ~ 2842214 (+)
G7296 sept9,LOC108411966 other upstream 506931 2530616 ~ 2558344 (+)
carm1 carm1 other upstream 984734 2050283 ~ 2080541 (+)
LOC103037883 LOC105898698,LOC103360086,LOC101074561,LOC107391594,LOC102794576,LOC103154361,LOC100701095,LOC105938735,LOC105901802 other upstream 1017712 2039387 ~ 2047563 (+)
G7109 NA other upstream 1719844 1340206 ~ 1345431 (+)
G7593 LOC107551170,LOC107729520,LOC107687640,LOC108434904,LOC100304518 other downstream 347224 3449221 ~ 3452666 (+)
natd1 natd1,LOC107745813,LOC107689058,LOC107661164 other downstream 822288 3924285 ~ 3929242 (+)
atp6v0a1 atp6v0a1,LOC108444241 other downstream 1650799 4752796 ~ 4802501 (+)
LOC103045997 si:ch211-210g13.5,LOC108441607,LOC107729192,LOC107687011,LOC108256246,LOC107755565 other downstream 2083537 5185534 ~ 5328867 (+)
hcrt hcrt other downstream 2230068 5332065 ~ 5339089 (+)

Expression


Co-expression Network