ankle2 (ankle2,LOC102797792,LOC102795364)


Basic Information

Item Value
gene id ankle2
gene name ankle2,LOC102797792,LOC102795364
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 26972252 ~ 26982609 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675746.1
GAAGAAACAGTAGCATGGCAGGCTGTTAGCACAGCAgctaatttacctcagaaagGTGATAATACAGGGCGGAGAGGGGGGATAGCGGGGTCGCCGCGGGGCCTGAGGGGCGGATTAGACCGTGAGGGTCACCGGGAGCCCCGCCGCTCCTCCGGCGGGCGGAAAATTaacacaataacaacaacagcagcggCGGCGACTGGGATGGAGCTGCAGGACTACTGACACAGCCCAGCGCGCGCTcgcgtgtgtgtgagaaggaGCAGCAGAGCCCCTGTGTGCAGGAATAAAGgTGCAGTATGGAGGCAGCTCTGAGCCGGCTCAGGGCCCTCACCGCTGATGAGCTGAGGGAGGAATTTACGAAGGCCAACTTGAAGTGCGGCCCAATCACGGCCACCACGAGGGCCATCTTTGAGAGGAAGCTCGCCCGGGCGCTGCTGGAAACTGCCGGGATCTCTGAAGCAGACGGTGGCGCTGCTGATGGCGGGCAATGTGTCTCCACAGAGGCGTGTGGGGCTCCTGCAGGCCCTCCCCCGGTTGCTGCAGTGGGAGAGGAAGGAGACGTGGGGTACGATCTGGGTCTGAACCCGCCGGAGGAAGAACCGCTGAGTGATAAAACCCAAGCGACCTCCACTCAGCTCGACACACAGACCCCCTCAAAAACCCTGCACATCTCCCCTACCTTCTACTATGGGGTGTGTCCACTGTGGGAGGATGTTCTGGCCAGGAATGAGCGGGCTCACGTGTACATGGATAAGAAGGAGGCTCTGCAGGCGGTGAAGCTGATGAAGGGCGCGCGGTTTAAGGCCTTCTCCAACCGAGAAGATGCCGAGAAGTTTGCCAAAGGAATCTGTGACTATTACCCCTCACCCAGCAAGGGGGCGCCGTGTGTTTCACCTGTTAAAGCTGGACTGGGCTTCTCCAAAGcgGAGGGCTCGGTGGAGACGGATGGTATAAATCGGGAGAAGGCGAACAGTTTTAAGAGTCCGAGGACGCAGGATCTGACGGCGAAGCTGCGGCGGGCGGTGGAGAAGGGGGACGAGGTGGCGTTCGGCGAGCTGGTGTGGAGTAACCCTCGCTACCTCATCGGCTCCGGGGATAACCCCACCGTGGTGCAGGAGGGCTGTCGGTATAATGTGATGCATGTAGCAGCGAAGGAGAACCAGGGGGGCGTGGCTCAGCTGCTCCTGGACACTCTGGAGAACCCCGAGTTCATGCGCCTCATGTACCCCGACGACCTGGAGAGCATGCTGACCAAACGCATTCAGTACATCACTGACCTGTACCTCAACACACCCGATAAAGCTAGTTTTGAGACTCCACTCCACTTCGCCTGTAAGTTCGGCTCCGCGGCCGTGGTGAACGTTCTCTGCTCGCATCCTGACATCGACAAGAACTGCAAGAACAAGTACGACCAGAGACCCGCTGACGTTGTTTGTGAAAGAATGAAGGACAAAAGTAAAGTCCAGGACGTCAAGCAGAAGATTAACGAGTATCTAGAAGACCGCTTTTACGTGCCCCTCCTACGAGCTGCTGATAACTCATCCCAGCCTGTGATTGGTGCTCCTTGGTCGCCGGAGCCGCTGGAAAACCGGTCGCCACGATTACCCAGAAGCCCCATGGACCCTGTGATGGCGGTGAGGGCCTTTGCCGGCCCTTTAAGTCCTTCTAAAGCGGATGAATTCCGGAAAGTGTGGAAGACGCCCCCTAGAGAACGAGCGGGGCATTTTCACAACATACTGAAGTCTGATCCAGACCGCGGCGCTGAAAGGGTCGGCAGAGACCTGGCGCGGGAGCTGGGACACCCCTGGGCGGAGTACTGGGACTTTCTGGACAGCTTTGTGGATCTGGCGTCGGCTGAAGGTCTCCGGCGGCTGGAGGAATATCTGAGTAAGAAGgagttcagtgtgtgtggtCATAAAGAGACGGGCGAAAACGAGACCAGCAACAAGTTCAGAACTCCGTCTCCAGgtaAACCGAAGAAGTTCAGCAACTCGGTGTCGGTGGGGGCGTTCCTGGACGAGGGAGCAGATATCTCTCTGGAGGAGATAAAGAATCGGCAGAACGCGGCGCTGACCAGCTGTTCTAAAGACAGCCAGCGGGGGGCGTCAGGGGGGCTGGAGTTCCACATCCTGCCGGTTTCGCACGGCTCCGCCCTCATCGAGCACGAGCTGCTTCTTTCCGACAAGACTCTGAACGGGCAGGTGGGCGGAGACCGGACTCAGAACGGCGGCGGCGGCGATGAAACGACGAAACGAAGCTCCGCCTCCTGCCTGCTGTCGCCCATTTCCAACCTGATGGTGGAGTTTGAGCGCATGTCTCTGCGGGACGAGGAGACGGAGAGCAGCCCGAGGGAGCGGAGGAGGAGCGGCGGGAGGCGGCAGCGGGACGTCCCAGACATCAGCCGGCTCAGCCTGGGCCCCGGGGACGACGGCGCCGTGTTCACCGAGGGAGAAAAGGACGGGGCGGAGGGGGCGGAGCTGTCCAGCGGCAGCTCGGAGGAGTATTTCCTGGCGGAGGAGAATGTGGAGAGTGGCAGGACTAGAGTGGGGGAGCGGCAGGTTTGCTCCCGCTCCAGGTCGTGGGAtcactgtagctccgcctcctcggGCTCTTATAAATCGCTGGACCGCTCGAACGAGATGATCTTGACCACGCCTCCACGAGCCCGGAAAACTCTGTTCATTGAAGGGGAGTCTCCCACCAAACTGGACCGAGAGGTTCTGGCAGCAGTAGAAGGCGCCGAGATTGACCCAGAGAAGTATCCCACCGTTCACAAGTGGAAAAGCACAATTCAGTCCTTCTCCAGCAGCGATATGCAGAGttggccGACTCCTGCTATCTTGAGGAGCTCCAGGCTGCAGTCGTTGACGCCAGGCTCTCCAGTCAGTGGTTTGGTATCTCCATCAGGGCGTTACAGTCCAGCCAGACTTGCATATTCACCAGACGTTTCCAGTCCTGGACGTTACAGCCCCGCCCACGCCAGTTACAGCCCCGCCCACACCGGCTACAGTCCTGCCAGCTACATCCAGCGTATTCGCCTCAAGCATTTTGGCGACTCGCCCATTTAACGAATGCTTACCCGTTCTCCAGCAGCACCTCGCCCACCCGAAAGCGACCGGGCCCTCCGGCTTCGTCCCTCCGAATGTAGGAAAGGAATTCAGCGTCTCAGAACCACGACTTTGTTCACTCAGAAACAAAACTCGCTCCCAAACTCAGACACGTCTCAGCGGTTCTGAAAAATAAACTTTACGTGGTACTTTAGTGCGGGGGTACTCATCATGAATGgtagtgtatatttttaaacaagtgtcttttttttttttttctcttatataaatatatataaatatgaatatatatatatgtgtgtgtgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgagAGAATATTGTCCATAATTATTTATGggtaaaacaattttaaaaataaataaataaaaatctgcagCACATTTTTACAACACCCTGATCCTCCCTCGCACATAAAACCGCTCCTAATTGggacattaaattaaataaaattaatttaagttaaattaaaaacaaaatgttttatttttttcagtgtaactCAGTAGCTCAAAAGTCATATTCCATTAAAGAACGTCCGTCTCTCTGCCTTAATTTTCTGCAGCCTCTCTAAACGTCACTGCGCCCCCTAGTGGGCATCAGCAGTGTTCAGTTCTCAAACTATGACCTGTTCTAACGCTTTAACGTTGTTTTGGAATGTGAAACGAGTCTCAGTTGTGGATTATAAATGTGTGACGGTAATGATAATTAAAGTTTGCCTTTGCTTTGCACTTTTAAAGCTTCTTTTCGTTAGTAATTCTTTAAGTACTGCTTTGCACATGCGTAAAACATTTTTCAGCAGGTATTTACAACAGCaaaacttaaaaacaaacaaaaaaaaaacatctctcaTAAAAGCGATAGTTCAAGAGGTGCACAGAATATTTGCCAACCAAGACGAGTCAGCCAGAAATGGCAGGAAAGTGCTATCATGTTCAGCCGAAGAACTGAAAAGTAAAAACTTAGCCATTTA

Function

symbol description
ankle2 Predicted to enable protein phosphatase 2A binding activity. Predicted to be involved in negative regulation of phosphorylation and positive regulation of protein dephosphorylation. Predicted to act upstream of or within cell division and mitotic nuclear membrane reassembly. Predicted to be active in endoplasmic reticulum. Human ortholog(s) of this gene implicated in primary autosomal recessive microcephaly 16. Orthologous to human ANKLE2 (ankyrin repeat and LEM domain containing 2).

NR:

description
PREDICTED: ankyrin repeat and LEM domain-containing protein 2

GO: NA

KEGG:

id description
K21412 ANKLE2, LEM4; ankyrin repeat and LEM domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675746.1 True 4067 mRNA 0.54 14 26972252 26982609

Neighbor

gene id symbol gene type direction distance location
poli NA coding downstream 13420 26947658 ~ 26958832 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323 coding downstream 26049 26939843 ~ 26946203 (-)
LOC111194248 LOC108444178,LOC106456176 coding downstream 35442 26933254 ~ 26936810 (-)
LOC103036549 NA coding downstream 51001 26915440 ~ 26921251 (-)
LOC103036237 NA coding downstream 85841 26884856 ~ 26886411 (-)
golga3 golga3 coding upstream 1275 26983884 ~ 27007880 (-)
ranbp1 ranbp1,LOC107752129,LOC107684983 coding upstream 26938 27009547 ~ 27019342 (-)
LOC103032722 LOC107690236,LOC108276491,LOC107733827 coding upstream 145989 27128598 ~ 27319845 (-)
LOC111193779 LOC108436637 coding upstream 427270 27409879 ~ 27507368 (-)
LOC103029886 LOC107738631 coding upstream 567700 27550309 ~ 27569402 (-)
G14125 NA non-coding downstream 7559 26963642 ~ 26964693 (-)
G14112 NA non-coding downstream 9687 26937876 ~ 26962565 (-)
G13963 NA non-coding downstream 294346 26676771 ~ 26677906 (-)
G13801 NA non-coding downstream 660502 26311435 ~ 26311750 (-)
G13769 NA non-coding downstream 996269 25971405 ~ 25975983 (-)
G14130 NA non-coding upstream 62899 27045508 ~ 27046047 (-)
G14131 NA non-coding upstream 64260 27046869 ~ 27047115 (-)
G14128 NA non-coding upstream 128579 27111188 ~ 27125507 (-)
G14152 NA non-coding upstream 444193 27426802 ~ 27430492 (-)
G14156 NA non-coding upstream 476274 27458883 ~ 27462491 (-)
G14113 NA other downstream 69539 26899005 ~ 26902713 (-)
fam109a LOC108415891 other downstream 138639 26824856 ~ 26833613 (-)
G13960 dscaml1 other downstream 273459 26670119 ~ 26698793 (-)
nars2 nars2,LOC107670421,LOC107740380,LOC107724941,LOC107699825 other downstream 955856 26002331 ~ 26016396 (-)
G13677 rnf168 other downstream 1246096 25724913 ~ 25726156 (-)
fam214b fam214b,LOC102776582,LOC107684984,LOC107595918,LOC107672624 other upstream 40886 27023495 ~ 27038746 (-)
carhsp1 carhsp1,LOC107733846,LOC107576530,LOC107738622,LOC107590589,LOC107690249 other upstream 1766925 28749534 ~ 28796458 (-)
emp2 emp2 other upstream 2630877 29613486 ~ 29643303 (-)
dexi dexi,LOC107590611 other upstream 2775078 29757687 ~ 29761252 (-)
LOC111193878 NA other upstream 2906190 29888799 ~ 29892305 (-)

Expression


Co-expression Network