eci1


Basic Information

Item Value
gene id eci1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 28821968 ~ 28829514 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675901.1
AGAGGAATTTAAGGGGAGGAGAGGCCACACTGTCAGACTTGCACAGCAAGAAGAGGATCTGCTTTCAGAAGCTTCAAGAGGAAGTGGTTAGCTATGGTATTCAGCACATTGCTAGCTTGGTGGCTAATCTGAGAGAAATGGCTTCAGTGCTGAGACAGGCGGCGCGGCTCGCGTCTTCTAGGTGTCTTACCCAGCTCTCTGCAGCTAGCAGTACTAGCAGACTTGGTGCTTCATCTTACAACTTCAGCCCCAGCAGCAGAAATGCATCAACATCGTCCACAATCAAAGTGCAGCTGGACAGTAACACAGGCGTTGCTATAATGATGTTTCAGAATCCTCCAGTCAACAGCATGAGCCTGGACTTTATGACAGAGTTTGTCATCGCTTGGGATAAGCTTGAACTTGACAAGAGCTGCAGAGGAATTATTCTAACATCTGCTTTGCCAAATGTTTTCTCTGCTGGCTTGGACATCATGGACATGTATGGGACGACCCCGGAGCACCGCACAGCGTTTTGGAAGGCTTTGCAGGAACTTTGGCTGAAAGTGTACGGCTCTGGCAAGATTGTGGTTGCGGCCATTAATGGTGCCAGTCCTGCAGGAGGCTGCCTTATGGCCTTGTCTTGTGACTACAGGATCATGATTGACAATCCTAAATACAAGATTGGCATTAATGAAACTAAGCTTGGCATTGTTGCACCGTTCTGGTTTAAGGATTGCTTGGAGAACACTGTGGGCTACAGAATGTCAGAAATGTCTGTTCAGTATGGCATATTGTACAACTCTGCTGAAGCACTGAAGATTGGCTTGGTGGACCAGTTGGTTCCAGAGGATAAACTTATCAGCACAGCCACCGAAACTATGATCAAGTGGTTCGCCATTCCAGATTATGCCCGACAGATAAGCAAGGCCATGGTCAGGAAGGCTACAATGGACAAAATGTTGGCAGGCAGGGAGGCTGACATTACTAATTTCGTCACCTTTACCAACAAGGATTCCATCCAGAAGTCTCTTGGGATGTACATGGAGATGCTGAAAGGCAGAAAGGCCAAATAGGACTGAATTACAATTGGGTGCCTTCACaggttcatttattttatctttcatataaaaaaaaaccttccatCCATCAATTTGTTCATCTTGCTTTCTGTTTCTTTATGATTTGGGGTCATGGTGAGTCTAAATTCTCCTGGAATGGGCAACAGTTTCAACACCTATTCGCTCAGACACACCCTCACACCTAAGAGTGTGTTTTTGAAGGGTGCAAACACACCACAGCACTCTGGAGGAAATCCACAgagagaccacacacacacacaccagaggtCCCTGGAGCTCTATGGTATATACTACCTGCTGCGCCTCTACCATAATGCCCAGTTCAGCTAGTTGTGTTCTGTCTACATGGACCTATTAAAACGTAATGTTATA

Function

NR:

description
enoyl-CoA delta isomerase 1, mitochondrial-like

GO: NA

KEGG:

id description
K13238 ECI1, DCI; Delta3-Delta2-enoyl-CoA isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675901.1 True 1433 mRNA 0.46 8 28821968 28829514

Neighbor

gene id symbol gene type direction distance location
naa60 naa60,nat15,LOC107690248,LOC107568044,LOC107685925 coding downstream 9844 28802090 ~ 28812124 (-)
tmem114 tmem114 coding downstream 159666 28633776 ~ 28662302 (-)
LOC103034330 sept12,LOC107733855,LOC107568113,LOC107690244,LOC107738615 coding downstream 797167 27852176 ~ 28024801 (-)
LOC103033698 LOC108436663,LOC108256318,LOC105900006,LOC106596483,LOC107738612 coding downstream 1192722 27604572 ~ 27629246 (-)
alg1 alg1 coding downstream 1232670 27577763 ~ 27589298 (-)
clcn7 clcn7,LOC107738625,LOC107590582,LOC107685922,LOC107733862,LOC107690253,LOC107568008 coding upstream 75547 28905061 ~ 28933768 (-)
ptx4 NA coding upstream 105112 28934626 ~ 28943090 (-)
usp7 usp7 coding upstream 136971 28966485 ~ 28995105 (-)
grin2a grin2a,LOC107690256,LOC107685916,LOC107568390 coding upstream 481896 29311410 ~ 29583262 (-)
socs1 socs1 coding upstream 1048527 29878041 ~ 29880914 (-)
LOC111193842 NA non-coding downstream 6090 28813041 ~ 28815878 (-)
G14394 NA non-coding downstream 106685 28697362 ~ 28715283 (-)
G14339 NA non-coding downstream 191154 28630590 ~ 28630814 (-)
G14333 NA non-coding downstream 271264 28550453 ~ 28550704 (-)
G14330 rbfox1 non-coding downstream 284778 28519571 ~ 28537190 (-)
G14415 NA non-coding upstream 69839 28899353 ~ 28900100 (-)
G14412 NA non-coding upstream 74247 28903761 ~ 28924250 (-)
G14417 NA non-coding upstream 121231 28950745 ~ 28951228 (-)
G14420 NA non-coding upstream 130827 28960341 ~ 28963827 (-)
G14425 cunh16orf72,LOC103025273,LOC105900007,LOC107685917 non-coding upstream 177518 29007032 ~ 29011028 (-)
carhsp1 carhsp1,LOC107733846,LOC107576530,LOC107738622,LOC107590589,LOC107690249 other downstream 25510 28749534 ~ 28796458 (-)
fam214b fam214b,LOC102776582,LOC107684984,LOC107595918,LOC107672624 other downstream 1783222 27023495 ~ 27038746 (-)
G14113 NA other downstream 1919255 26899005 ~ 26902713 (-)
fam109a LOC108415891 other downstream 1988355 26824856 ~ 26833613 (-)
G13960 dscaml1 other downstream 2123175 26670119 ~ 26698793 (-)
emp2 emp2 other upstream 783972 29613486 ~ 29643303 (-)
dexi dexi,LOC107590611 other upstream 928173 29757687 ~ 29761252 (-)
LOC111193878 NA other upstream 1059285 29888799 ~ 29892305 (-)
rps15a RPS15A,rps15a,MGC114789,LOC107686992 other upstream 1431504 30261018 ~ 30268350 (-)
LOC103043612 LOC108259106,LOC108412590,LOC107654745,LOC107710331,LOC107602379,LOC105006578 other upstream 1844546 30674060 ~ 30725921 (-)

Expression


Co-expression Network