LOC103029347


Basic Information

Item Value
gene id LOC103029347
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 32921025 ~ 32943593 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022676517.1
cagcaggtccAGACAGgagactgagtgtgtgtgcagtgtgtataggtgtgtaggtgtataggtgtgtgtgtgtggaggtgtgtgtgggtgtatagAAGTGATGAAGACTCTACAGATCATCCTCTTCCTCATGGTCTGCTGGAATGATGCTCAGGTTCGAGCGAAGACTCAGGAGTTCTTCATCGCCGCAGTGGAGACAACCTGGGACTACCTCAACACGGACAGCACCGACCCAACAGCCAATCAGCGGAGATTTGTATCCGGAGTTCAGAGGTTTAAGAAGGCGGTGTTCACCGAGTTCACCGACTCCACCTTCACCACCCAGAAATCCAAACCTCCATGGGCCGGGATCCAGGGTCCTACGATCCGGGCCGTGGTGAACGACAGGGTGGTGATCCACTTTAAAAACTTGGCCTCCCAGAACTTCAGCATCTCCCCCATCGGCATCCCGTACTGGAAGCAGTCAGAAGgtgtgggGTATGATGACTCCAGCTCGGTGCAGGAGCGTGAGGATGACGCGGTGCGGCCCGGTGGTTATTATAAATACGTGTGGGATATTCACCCAAACAGCGGCCCGACCCTCACCGACCCGGACTGCCTCACCTACTCCTACTCCTCTCAGGTGGATCCGCTCCGGGATTTCAACTCCGGACTCATCGGAGCCTTCCTCATCTGCAAATCAGGTTCGGTGACGGAGGAGCGCGAGAGGAAGGTTGCGGAGGTGGTTCTGTTGTTCGCGGTGTTTGATGAGGGTAAAAGTTGGTACAGAGATCTGAGTCGATCAGATAAACCCAGGAAAGCTTCAAGTCGCCAGTTTCACACCATCAACGGCTTCATCAACTCCACACTGCCAGGTCTGAAGCTCTGTCTGAAGAGCCCAGTGGTCTCCTGGCACCTGATTGGTCTGGGCACCACTCCAGACATCCACACCATCCAGTTCCAGGACCACACCCTGAAGGTGATGGACCACAGGAGGGTCACGGTGGAGATCACGCCCATGACCTTCACCACGGCCCTGATGAAGCCCAACACCGAGGGGAGGTTCCTGATCTCCTGCAGGATCCACTCCCACCAGCAAGCTGGTATGAGTGGGTTCTTCACGGTGGAGGACTGCCCAGAACCCGCAGATCTGCCCGACAAACGTAACTCCAAAAACAGCGAGGAAGAGGATCAACAGGGGGATGAAGATTACTCTAATGACCTGTTTTCCACCATCGTGTTCGGACCTGGAGGACCAGCTTCTGTTCTGAGGTCGACTGGAAGAGGACGACCCAAAGTCTGGGTCCATTATATCAGCGCTGAGGAGATCACCTGGAACTACATCCCCCAGAGAGAGCGGGCGACGGCGTCGGACCCCTCAGGTAACCGGGGGCAGCGCTGGGGGAAGGTGTATAAGAAGGTGGTTTATGTGGAGTACACAGACAAAACCTTCACGGTGAAGAAGAGCAAGAGCGACTCTCTGATTGGTCCAGTGCTCAGGGGGGAGGTGGAGGACCATTTCCAGATCGTTTTTAAGAACAAGGCGAGTCGACCGTACAACATTTACCCCAACGGACTCGCCAATGTCCAACCGGTGAAGAAGAGAGGGCAAGAGAAGCCGGTGGACCTGAGGTCTATGGCCGTACCTCCAGGTGAGATAATGATGTACCTGTGGAAGCTGACGGCTGAAGATGCTCCCGCTGATGCTGACCCGCGGTGCCTGACCCGTCTCTACCACAGCACGGTGGATCCGGAGAGGGACGTGGCCTCTGGGCTGGTGGGACCTCTGATCATCTGCAAATCACAGAGTCTGGACAAGCGAGGGAGAGTGgTGACCTCAGACAGAGAACGTCATCTAATCTTCTCAGTGTTTGACGAAAATAAAAGCTGGTATCTTGAAGACAACATTCAGAAATACAGTGAAGATCCGTCCAAGATCGACCGCAGTGATCCCCGGTTTCGCGAATCTAATGTCAAGTACAGTGTGAATGGTTTTATGTATAACAGTCTGCAGTTTAAGATATGTGCGGGGGACGTCACCCTGTGGCACGTGGCCAGTGTGGGCATGGAGAGTGACTTCCTGTCTGTGTATTTTACCGGAAATCCATTTGAGAAGGACAAAACCTACGGCACTGTCCTCACCCTCTTCCCCATGAGTGGAGACACCGTCACCATTGAGATGGAGACAGAAGGCGAGTGGGAGATTGGAGCATTTGATCCAGAATTGAAACAGCGAGGCATGAGAGCACGATATTCTGTAATTAACTGTGGGGAAATACTCCCCGTGGTGGACAGTGAAGATTACGAGTCCGACTTTGAGGACTACTTGGACCAGAAGTTTCCAGTCCCAAGAGGTTTCAAGCAAAGAAACCGAACAATGGCCATCCGGGTCTGCAAGCGACCATCGAGGAACAGAACCAGATTGGACGTCCAAGCAGGCCATGAGAACGCTATTCCGGAAGCCCTGGGGGGAAGAAACACTCTGGTGTGTGAGATAAAATTTGTACCGGTGGAGGAAGCCGAAGATCTGGATGTTCTATCGCAGGGAGGAATTCCGCAGGACATTCTGGATCAACTGGACGTGGAGATGGGAAGAAGCTCTTCGAGACGTCAGGGGAGGGCTGTTCCAGAAGCAGAGGGAAACCAAAGTCTTCCTCGTTCCCACCAAACAAGCCTGGAAGGGTCAAATGAGATCGAGATGGAAGTAGAAGATACCTCCATGATGAAGGAAAACCAAAGcataccaaacaccatcacgtCATCAATATACGACAGCGAGGCTTCAACAAAGTCCTTCAACCGCAAGAACGATTCTTCGATTGACCTCTTCAAGAAGTTCATTCAGAAATCCACCTGGAACATGACCACTGAACCCAACAAACATCAGGATGACCACCTGGAAGACTCTGAAGTAACTTCAGAACCCAATTCTAACCTAACAGAGAGGAGTAGGCGGCAGACGTGGGGCGTTCACAAGGAAGAAGACGAAATCGCAATCCCAAACGATGTTTTGAGCGAAAACGATATTCTGAATGACGACGTTCAAGAGGTGGACAAGCTGGTGGAGAGCCTGAATCTTCAGAGCTACCCCCAAAAACAGCCACCACCAATTCCTAGCTTAACATCTCAAGTTTCCTCAACCAACCAAACTTCCTCACTAAACCAATCCGCCCCAAAACAGAGCTCTACGAACATCGACTACGACGATTACGAAAGCGAAGGGAACGAATCCACACTGAGCTTCAACACCTGGGACGGAATGAACATCAGGTCCTCCGAATCGAAGTTCCGTAGCTACTACATCTCAGCCGAGGAGATCCTGTGGGATTACGGGATCCAGAAACCTGCCCATCTTCTCACTTCCAGGGAGATGAGACGAGGAATGAAGAAGTATCTGACATCCTACAGGAAAGTGGTGTACAGAGCGTACCATGACAAAGAGTTTCAGAAACCGGTGAAGCGTGGAGAGCTGGATGAACATCTTGGTATCATGGGCCCTGTAATCAAGGCTGAGGTCAACGATTTCCTCACTGTGGTCTTTAAGAACCTCGCCTCCAGGCCGTACTCACTGCACCTTCACGGGGTGTATGATAAGACCACGGGGAGTTTTGGGCCGGGAGGAGTTCCAGGAGAGGGTCTGAGAGATGGAGAGGCTCCTGGAGACCCGGTTCCTCCGGGAGAGGAGAGAGTTTACAACTGGAGAATCACCAAACGACAGGGACCATCGACTAAAGACTTCGACTGCAAGGCTGGAGCTTATTATTCCACAGTCAACATGGAGAAGGACATAAACTCTGGTCTGATTGGTCCACTGCTGATCTGTCGTCCAGGGACGCTGCATCCACGGGTCCTGCTGCAGCCCGGAGTTCAGGACCTGTTCCTGCTCTTCACCATATTCGACGAGAGGAAGAGCTGGTACCTCGACTACAATATCAGGAAGTTCTGCACGCCACCCTGCCAGGCCAAACAGGACGACCCTTGGTTTGAGACCAACAACAGATTTGCAGCCATAAACGGATATGTTGCAGAGACTCTGCCCGGCCTGGAGGTGGCGCAGCACCAGACCTCTCGCTGGCACCTGCTGAATGTGGGCAGCGGAGGAGAATTCCACGCCGTCCACTTCCATGGAATTCCGTTCAGCGTTGGGAAAGATCAGGAACATCGGCTGGGAGTTTTTAACCTTTATCCTGGTGTGTTCGGCACGGTGGAGATGAGGCCGGCTATAGTTGGTACCTGGATGGTGGAGTGCACTATTGGAGAACACCAGCTGTCCGGCATGAGGGCCAAACTGCTCGTCTACAACCCAcGTTGTGTTCAGCCGTTGGGAATGCAGTCAGGATGGATAGATGACGACCAAATCACTGAATCTGATCATTATGgTAACTGGGAGGCGAGATTAGCCAGACTGGAGTTATCAGGATCTATTAATGCTTGGATTGGTAATGGACAGGGTTCTTGGATGCAGgtgGATTTGCTGAGGCCCATGGTGGTGCACGGGATCCAGACTCAGGGAGTGAAGACCTCGATGCGTCTGAGCGAGATGTTCGCGGTGATTTTCACCATCAGCTACAGTCTGGACCAGGAAACCTGGAAAACCTACAGAGGAAACAGCAGTGAAGCCGCCTACAAATTTAATGGGAATATGGACGGATACAGGATAAAGGACAACTTCTTCAATCCTCCAATCATCGGCCGATATATCCGCATTCACCCGCTCACCTTCGGGACTCGTCCCGCACTGAGACTCGAACTGCTGGGCTGCGATCTCAACAgcTGTTCCCTGCCGTTGGGTATGGAGCGTAGGCTAATTCAGAACAGCCGGATCAGCGCCTCGTCCTTCCACCAGAACTGGATGCTCTCCTGGAGTCCGGATCTGGCCCGGCTCAAGCAGGAGGGTCGTGCCAACGCCTGGAGACCCAAGagTAATAACCCTCATGAGTGGCTGCAGGTGGATTTGGAGGTGGTGAAGAGAGTGACGGGTATTCTGACCCAGGGAGCAAAATCCATGCTGACCCACATGATGGTGACGGAGTTCACCGTGTCCGTTAGTGACGACGGTCGCACCTGGTCCCCCGTCACCGAGCAGGGAACACATCGAGAACAGATCTTTGAGGGGAACAGTGATGCTTATGCAGAGAAGCTGAACCTGCTGGAGCCGCCGCTCTTCACCCGATTCATCCGCCTCCATCCTAAAGGCTGGATCAACGACATCGCCCTCAGACTGGAGTTCCTGGGCTGTGATACACAAcagagactgtgagagagagagagagagagtcattgACACTGAATGTAAACGATTCTTTTAGTTGTCTTTAGAAAAACTAGTAAAACTTCACTCATCATTATTAAAACTGTGAAGAAATCGATCTGCTCATGAAGTTCAGGGTATAATAAAGCTCAGCGCATCAGTATCGGCCAGTATTTCTCTATAGTAAAGTAACTATGTGTAAATAATGCAGCTACTACTGAGactgtttttaaaactgtagATTTGAGAGTTTGCACTG

Function

GO: NA

KEGG:

id description
K03899 F8; coagulation factor VIII

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022676517.1 True 5489 mRNA 0.52 25 32921025 32943593

Neighbor

gene id symbol gene type direction distance location
LOC103029668 NA coding downstream 55688 32860683 ~ 32865337 (-)
LOC103039156 sec24b,LOC108434542,LOC107596339,LOC107731363,LOC107662171,LOC107704651 coding downstream 62730 32834496 ~ 32858295 (-)
LOC103031569 NA coding downstream 170260 32734285 ~ 32750765 (-)
rest NA coding downstream 262375 32649063 ~ 32658650 (-)
polr2b polr2b,LOC102791558 coding downstream 282107 32622181 ~ 32638918 (-)
LOC103028197 NA coding upstream 12538 32956131 ~ 32959840 (-)
LOC103027351 LOC108434533,LOC105893001 coding upstream 92256 33035849 ~ 33073381 (-)
kiaa0141 NA coding upstream 131540 33075133 ~ 33084176 (-)
nudt6 nudt6,LOC107690594 coding upstream 149272 33092865 ~ 33101606 (-)
ankrd50 ankrd50 coding upstream 357640 33301233 ~ 33348173 (-)
G15276 NA non-coding downstream 7459 32912229 ~ 32913566 (-)
G15273 NA non-coding downstream 8896 32897427 ~ 32912129 (-)
G15272 NA non-coding downstream 12890 32906029 ~ 32908135 (-)
G15249 NA non-coding downstream 125195 32795378 ~ 32795830 (-)
G15244 srp72,LOC107662169,LOC107552350,LOC107731365 non-coding downstream 126683 32784189 ~ 32794342 (-)
G15289 NA non-coding upstream 27944 32971537 ~ 32983360 (-)
G15300 NA non-coding upstream 69777 33013370 ~ 33023936 (-)
G15302 NA non-coding upstream 72672 33016265 ~ 33018552 (-)
G15303 NA non-coding upstream 75519 33019112 ~ 33040395 (-)
G15290 NA non-coding upstream 89577 33033170 ~ 33066563 (-)
hopx hopx,LOC107552340 other downstream 100221 32814048 ~ 32820804 (-)
nfkb1 nfkb1,LOC106536450 other downstream 761062 32122222 ~ 32159963 (-)
G14839 NA other downstream 1865522 31053764 ~ 31055503 (-)
trnap-agg_1 NA other downstream 1996938 30923812 ~ 30924087 (-)
G14781 LOC107602351 other downstream 1997776 30914910 ~ 30923249 (-)
G15497 NA other upstream 1190999 34134592 ~ 34136732 (-)
evc2 NA other upstream 1208230 34151823 ~ 34172017 (-)
G15498 NA other upstream 1297733 34241326 ~ 34242318 (-)

Expression


Co-expression Network