lyar


Basic Information

Item Value
gene id lyar
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 34071903 ~ 34078289 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022676715.1
AACCCGGAGTGTAAACACGGGCGCGCGCGGGTGCGTCGCTACGCGGCGTGGTTTACAGAGGAGACCCGGGTTTATCTGAACGGAGAAAAAAAtcagttattattaatattattattaatatttacccGCGCGCTCAGGGGGAGGAgtcgacagagagagagagaggatgGTGTTTTTTACCTGTAACTCGTGTGGGGAGTCTCTGAAGAAAGCGCAGATAGAGAAGCATGTGGGGATGTGCAGAGGAAGCTCCTGTTTTTCCTGCATCGACTGTGGAAAAGATTTCTGGGGGGAGGAGTATAAGAATCACCTGCGCTGCATCAGCGAGGATCAGAAGTACGGGGGGCGGGGCTACGAGGCCAAAGCCAATAAGGGAGATgtgaagcagcagcagtggatTCAGAGGATACAGGAGGCTCTGAGTAAACCCGGCGTCAGCGTCCGACTCAAAGACCTTCTCAATCAAATCTGTTCCTACGACAACGTTCCCCGAAAAAAAGCCAAGTTCCAGAACTGGATCAAGTGCAGCCTGAAGATCCACGACCTGAACCTGCAGAACCAGGTGTGGGAGATCATCTCTGCTGCAGAGAGCAGtAAACCCAACGGAACCCAGCGTCCAGAACCCAAACCAgaccctcctcttcctcagcagcagcagctccagacggaggaagaggaggagaaacccagagagaaaaagaagaacaagagagagagaaaagaggagagacagaaaaagaacaagaacaagaagaacGGAGAGAACACCACCGACGAACagaagataaagaagaagaaaaagaggaagagagatgctgaggaggaggaagaggggcaggatgaagaggaggagccAACAGTTAAaccaaagaagaagaaaggggAGGAGCCAGGTAAAGTAGAAAATCTGGAGGATTTAGCGGATCAGCAGGAGGATCAGCAGGAGGATCAGCAGGAGGATCAGTCCGGTTCTAAAGGAAAGTTTAACTGGAAGGGGACGATAAAGGCGGTGCTGAGGGAGGGGCCGGATGAAGGCCTGTCTGTCAAAAAGCTCCGCAAGAAGgtgctGGCGGCGTATTACTCGTTCAGTGGAGAGGGGAACTACAGGTCGGAGGAGGAGCTGTACTCTGTGTTTAACAGGAAGTTAAATGGACCCAAGTTTAAGGTTCTGAAGGATAAAGTGAAGCTGGTAAAGTGACCCGGATTTACCAGAACCAGAATcacaaccagaaccagaactgtTCAGATCTGTTTCTTTTAATGTACAAAATTCAGCTTTTCTTACAATAAACATCCTCAAAACAAA
>XM_022676718.1
GTGTAAACACGGGCGCGCGCGGGTGCGTCGCTACGCGGCGTGGTTTACAGAGGAGACCCGGGTTTATCTGAACGGAGAAAAAAAtcagttattattaatattattattaatatttacccGCGCGCTCAGGGGGAGGAgtcgacagagagagagaggatgGTGTTTTTTACCTGTAACTCGTGTGGGGAGTCTCTGAAGAAAGCGCAGATAGAGAAGCATGTGGGGATGTGCAGAGGAAGCTCCTGTTTTTCCTGCATCGACTGTGGAAAAGATTTCTGGGGGGAGGAGTATAAGAATCACCTGCGCTGCATCAGCGAGGATCAGAAGTACGGGGGGCGGGGCTACGAGGCCAAAGCCAATAAGGGAGATgtgaagcagcagcagtggatTCAGAGGATACAGGAGGCTCTGAGTAAACCCGGCGTCAGCGTCCGACTCAAAGACCTTCTCAATCAAATCTGTTCCTACGACAACGTTCCCCGAAAAAAAGCCAAGTTCCAGAACTGGATCAAGTGCAGCCTGAAGATCCACGACCTGAACCTGCAGAACCAGGTGTGGGAGATCATCTCTGCTGCAGAGAGCAGtAAACCCAACGGAACCCAGCGTCCAGAACCCAAACCAgaccctcctcttcctcagcagcagcagctccagacggaggaagaggaggagaaacccagagagaaaaagaagaacaagagagagagaaaagaggagagacagaaaaagaacaagaacaagaagaacGGAGAGAACACCACCGACGAACagaagataaagaagaagaaaaagaggaagagagatgctgaggaggaggaagaggggcaggatgaagaggaggagccAACAGTTAAaccaaagaagaagaaaggggAGGAGCCAGGTAAAGTAGAAAATCTGGAGGATTTAGCGGATCAGCAGGAGGATCAGCAGGAGGATCAGCAGGAGGATCAGTCCGGTTCTAAAGGAAAGTTTAACTGGAAGGGGACGATAAAGGCGGTGCTGAGGGAGGGGCCGGATGAAGGCCTGTCTGTCAAAAAGCTCCGCAAGAAGgtgctGGCGGCGTATTACTCGTTCAGTGGAGAGGGGAACTACAGGTCGGAGGAGGAGCTGTACTCTGTGTTTAACAGGAAGTTAAATGGACCCAAGTTTAAGGTTCTGAAGGATAAAGTGAAGCTGGTAAAGTGACCCGGATTTACCAGAACCAGAATcacaaccagaaccagaactgtTCAGATCTGTTTCTTTTAATGTACAAAATTCAGCTTTTCTTACAATAAACATCCTCAAAACAAA

Function

NR:

description
cell growth-regulating nucleolar protein

GO: NA

KEGG:

id description
K15263 LYER; cell growth-regulating nucleolar protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022676715.1 True 1306 mRNA 0.49 9 34071903 34078289
XM_022676718.1 False 1296 mRNA 0.49 9 34071903 34078281

Neighbor

gene id symbol gene type direction distance location
tmem128 tmem128 coding downstream 6855 34057798 ~ 34065048 (-)
otop1 otop1 coding downstream 16331 34044511 ~ 34055572 (-)
LOC103031787 drd5,LOC107701828 coding downstream 30789 34039409 ~ 34041114 (-)
LOC103022214 NA coding downstream 162826 33898858 ~ 33909077 (-)
ankrd50 ankrd50 coding downstream 723730 33301233 ~ 33348173 (-)
stx18 stx18 coding upstream 12345 34090634 ~ 34103374 (-)
cytl1 NA coding upstream 56297 34134586 ~ 34136572 (-)
LOC103038859 NA coding upstream 107339 34185628 ~ 34190394 (-)
crmp1 NA coding upstream 112858 34191147 ~ 34198885 (-)
LOC103041332 NA coding upstream 135475 34213764 ~ 34216327 (-)
G15486 NA non-coding downstream 29544 34041722 ~ 34042359 (-)
G15454 NA non-coding downstream 147895 33923606 ~ 33924008 (-)
G15452 NA non-coding downstream 180800 33833697 ~ 33891103 (-)
G15449 NA non-coding downstream 181073 33812017 ~ 33890830 (-)
LOC111194046 NA non-coding upstream 56297 34134586 ~ 34136689 (-)
G15509 NA non-coding upstream 79038 34157327 ~ 34158162 (-)
G15510 NA non-coding upstream 89253 34167542 ~ 34167902 (-)
G15512 NA non-coding upstream 95911 34174200 ~ 34175378 (-)
G15513 NA non-coding upstream 98912 34177201 ~ 34178567 (-)
hopx hopx,LOC107552340 other downstream 1251099 32814048 ~ 32820804 (-)
nfkb1 nfkb1,LOC106536450 other downstream 1911940 32122222 ~ 32159963 (-)
G14839 NA other downstream 3016400 31053764 ~ 31055503 (-)
trnap-agg_1 NA other downstream 3147816 30923812 ~ 30924087 (-)
G14781 LOC107602351 other downstream 3148654 30914910 ~ 30923249 (-)
G15497 NA other upstream 56303 34134592 ~ 34136732 (-)
evc2 NA other upstream 73534 34151823 ~ 34172017 (-)
G15498 NA other upstream 163037 34241326 ~ 34242318 (-)

Expression


Co-expression Network