cytl1


Basic Information

Item Value
gene id cytl1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 34134586 ~ 34136572 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022676762.1
GTGAGCGGATGGTTCTGATGTTCTGGTTTTTCTCCTCCACAGAAAGAGTGCGCTCAGGTTTTACCCAAGATGTTCCTGGACATACATAATTCCTGCATCACCGCTAAACTGCGGGACTTCCTGTACGTGGTGGAGAACCTGCCGGTGGAGGCCTGCCGAGAACGTCCGCGATTCGTCAACCTGAAGCGCAAAGTCCAAAAACTGTACTTCATCATCAGCCAAGCGTGCTACCGGgatctGGTGTATTTAACGGATGACTGTGAGGCTCTGGATACAGGATACAGCCGCCCACGATACACCGAGGACAGACTGCAGCTACTGGAGGAGACCAGctgagatacacacacacacacacacacacaatacacaaacacacacacacacacacacacacacacacacacatatatataaataaagacacAAGCTACAGATAAAACATGCAGTGGAGTTTTCTCTTTACTGCAGGTTTtgctggtttgtgtttttttatctacCTTTTctccactatctctctctctctctctctctctctctctctctctctctctgtgatgaATTCCTTCTTTTTTCAGGCTAATGTTGATGATGATTCACTTCCTCTGAGAGCTTCTTTAACCGCATGTTGTTGGTTCACAGCAACCGATTCCAAATATAATCTCCACCCCTAAAACCAGCTGCAGATCTTTTACCTCCTTAACTGAAGATGAATTAATAAAGAAGCTAAAATAGCTTTTCGCTTAAtctgaaaaatagaaaaatggttgtaatttctaaaaagttcatttgatattttgttaaaccccttgaattaaacctgaaagtctgaagttaaattatattttattttatattaattttaaatccaATATCCAGTACTCGCAGAATAcggtgtgtttttgttttaaactgaaaacatgcgcacacacacacaccacacaaacacacgcctGTTTCAgatgacgtgtgtgtgtgtgtgtgtctgcattcCAGCAGTGGAGGAAAACTTTCCACAGGAAATGAGGGAATGCGAGCGGCCCCCCAATCGCCCACAGCCCCCCCTATTATCATTATCCACAccagggggaggggcttcaGGTTACATGTAAACATCATCAGCTGATGTGGTTAATTTGGGAGGGACTAAATTACATCAATCAGAACCTAATAAATATACCTGGATTCTGAAGTCCAGTACAGAACCGGTTCCCACAGTATCAGTGCTGACGGGTCGAGCGAGCAGCAcactgaactctctctctcctgcagctCAGATCCGGCTCTACAGGACCAGAATAATTCACttctgctcaacatcaccattCTGTTTCTACATTACAGTTATCAGTTATTAGAGGATCTGCTTTCATTCCATCCCAACCTAATAAagacctgtatatatatatattactccTCTCTCTGCTGACTGTTTATCTGTTCATCCTGATGTAGCAGATCTATAATAAACAGCTG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022676762.1 True 1473 mRNA 0.43 3 34134586 34136572

Neighbor

gene id symbol gene type direction distance location
stx18 stx18 coding downstream 31212 34090634 ~ 34103374 (-)
lyar NA coding downstream 56297 34071903 ~ 34078289 (-)
tmem128 tmem128 coding downstream 69538 34057798 ~ 34065048 (-)
otop1 otop1 coding downstream 79014 34044511 ~ 34055572 (-)
LOC103031787 drd5,LOC107701828 coding downstream 93472 34039409 ~ 34041114 (-)
LOC103038859 NA coding upstream 49056 34185628 ~ 34190394 (-)
crmp1 NA coding upstream 54575 34191147 ~ 34198885 (-)
LOC103041332 NA coding upstream 77192 34213764 ~ 34216327 (-)
mcm7 mcm7,LOC107716516,LOC107744067,LOC107665623 coding upstream 83371 34219943 ~ 34228034 (-)
G15486 NA non-coding downstream 92227 34041722 ~ 34042359 (-)
G15454 NA non-coding downstream 210578 33923606 ~ 33924008 (-)
G15452 NA non-coding downstream 243483 33833697 ~ 33891103 (-)
G15449 NA non-coding downstream 243756 33812017 ~ 33890830 (-)
G15509 NA non-coding upstream 20755 34157327 ~ 34158162 (-)
G15510 NA non-coding upstream 30970 34167542 ~ 34167902 (-)
G15512 NA non-coding upstream 37628 34174200 ~ 34175378 (-)
G15513 NA non-coding upstream 40629 34177201 ~ 34178567 (-)
G15516 NA non-coding upstream 58203 34194775 ~ 34195228 (-)
hopx hopx,LOC107552340 other downstream 1313782 32814048 ~ 32820804 (-)
nfkb1 nfkb1,LOC106536450 other downstream 1974623 32122222 ~ 32159963 (-)
G14839 NA other downstream 3079083 31053764 ~ 31055503 (-)
trnap-agg_1 NA other downstream 3210499 30923812 ~ 30924087 (-)
G14781 LOC107602351 other downstream 3211337 30914910 ~ 30923249 (-)
evc2 NA other upstream 15251 34151823 ~ 34172017 (-)
G15498 NA other upstream 104754 34241326 ~ 34242318 (-)

Expression


Co-expression Network