mcm7 (mcm7,LOC107716516,LOC107744067,LOC107665623)


Basic Information

Item Value
gene id mcm7
gene name mcm7,LOC107716516,LOC107744067,LOC107665623
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 34219943 ~ 34228034 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022676810.1
GACTCCCGCCAGTTTTCGCAGACCGTGCTGTGTGGAGTGGAGCGTGCGCGGAGACACAGTGACGAAACTTTAACACTCGAGTTTCTAGATAATAACTCCTATAATCAATATTCTCCAAGGAATAAATCGATTTAGGATCGATTTAGGAGGCTGAACATCAAAAAGACCGATTGGAAATGGCACCGAAGGATTATTTAGCCGAGAAAGagaagTGCAAGCGCTTCCTGCAGGAGTTCTACTCTGAAGATGATTCTGGAAAGAAGGTGTTTAAATATGGAGCTCAACTGgtggccCTGGCACACAGGGAGCAGGTGGGCTTGGTGGTGGACCTGGATGACGTAGCAGAGGAAGATCCCGAGCTggtggaaagtgtgtgtgagaacacAAAACGGTACACAGTGCTGTTTGCAGATGCAGTCCATGAGCTTCTCCCAGAGTACCGGGAGCgagagGTAGTGGCCAAAGATGCGCTGGACGTTTACATCGAGCACCGGCTGATGATGGAGACCAGGGGTCGTGACCCCGCCGACATGAGGGACCCCAGGAACCAGTACCCTGCTGAGCTCATGAGAAGATTtgaggTGTATTTCCGGCCACCCTCCACCTCTAAGCCGAAGGTTGTGCGGGATGTGAAGGCCGACAGCATTGGGAAGCTAGTTACTGTCCGAGGAATCGTTACCAGGGCAACTGAGGTTAAACCAATGATGGCTGTTGCTACGTACACCTGTGACCAGTGTGGCGCGGAGACCTACCAGCCGatTGCGTCTCCGAGCTTCATGCCACTCATCATGTGTCCCAGTCAGGAGTGTGTGACCAATCGGTCAGGGGGGCGCCTCTACCTGCAGACCAGGGGCTCAAAGTTTGTCAAGTTTCAGGAGCTGCGGATTCAGGAGCATAGCGACCAGGTTCCAGTGGGGAACATCCCGCGCAGTATGACTATTTACGCCAGAGGAGAGAACACACGATTAGTGCAGCCGGGAGATCACGTGGCCGTTTCcggggtcttccttcctcttcttcGCTCCGGCTTCAGACAGGCTgtgcagGGTCTGCTGTCAGAGACGTACTTGGAGGCTCACTGTGTGACTCTGATGAATAAAACGGAGGATGATGAGCTGGGTACTGAGGACCTGAGTGAGGAGGAGCTGCGGCAGATCACAGaggaggATTTCTATGAGAAGCTGGCTGGGTCGATCGCCCCTGAGATTTACGGCCACGAGGACGTTAAGAAAGCGCTGCTGCTTCTGTTGGTGGGCGGAGTCGAACAGGCGCCTCGTGGGATGAAGATCAGAGgtaatATTAACATCTGTCTGATGGGAGATCCTGGAGTGGCCAAATCACAGCTGTTGTCCTACATCGACCGCCTGGCACCCCGCAGTCAGTACACGACAGGACGTGGGTCGTCAGGTGTGGGTCTGACGGCTGCAGTGATGCGTGACCCGGTTACCGGGGAGATGACCCTCGAGGGTGGGGCTTTGGTTCTGGCTGATCTGGGTGTGTGCTGTATTGATGAGTTTGACAAGATGGCAGACGCCGATCGCACGGCCATCCACGAAGTGATGGAGCAGCAGACCATCTCCATCGCCAAGGCTGGGATAATGACCTCTCTGAACGCACGCTGTTCCATCCTGGCAGCGGCTAACCCAGCTTACGGGCGCTATAACCCACGGAAGACCATCGAGCAGAACATCCAGCTGCCGGCTGCTCTGCTGTCCCGCTTCGACCTGCTGTGGCTCATCCAGGACAAACCGGACACTGACAACGACCTGCGTCTGGCCCAGCACATCACCTACGTCCACCAGCACTCCAAACAGCCCCCCACACACTTCACCCCCATCGACATGAAGCTCATGAGGCGGTATCTCAGTAAGTGTAAGAAGAGGCAGCCGGTGGTTCCCGAGGCTCTCGCTGATTACATCACCGCTGCTTACGTGGAGATGAGGAAAGAGGCTCGAGTGAGTAAAGACACCACGTTCACCTCGGCCCGAACCCTGCTGTCCATCCCCCTGTCCACAGCACTGgcaCGGTTGCGGATGGTGGACGTGGTGGAGAAAGAAGACGTAAATGAAGCCATGAGACTGATGGAGATGAGCAAAGACTCCCTACAGGCAGACAAATCAACCACCAccaggACCCAGCGGCCGGCGGACGTGATCTTCTCTCTGGTGCGAGAGCTGGCGGGTGAGAGCGGGAAGGTGAAAGCGGTGCGAATGGCGGAGGCGGAGCAGAAGTGTGTGTCGCGTGGTTTCACTCCGGCTCAGTTCCAGTCGGCTCTGGACGAATACGAGGAACTCAACGTGTGGCAGGTCAACCAGGGCCGCTCTCGCATCACCTTTATCTAATCGCACATCACTCCACACACTTGCCTCTTCCATGACTCCGTCTGCTGCCATACCTGCAGATTCTCTTTATGGActctttgaatttgaatttattGATCACTAAATGTTTtcagctgtttgtttgttttaatttgttattaatGCTGAGAAATAAAAACCTGTAAATACCA

Function

symbol description
mcm7 Predicted to enable single-stranded DNA binding activity. Predicted to contribute to single-stranded DNA helicase activity. Acts upstream of or within regulation of cilium assembly. Predicted to be part of MCM complex. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in hepatocellular carcinoma. Orthologous to human MCM7 (minichromosome maintenance complex component 7).

NR:

description
DNA replication licensing factor MCM7 isoform X1

GO:

id name namespace
GO:0032508 DNA duplex unwinding biological_process
GO:0006270 DNA replication initiation biological_process
GO:0042555 MCM complex cellular_component
GO:0005634 nucleus cellular_component
GO:0005524 ATP binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003678 DNA helicase activity molecular_function

KEGG:

id description
K02210 MCM7, CDC47; DNA replication licensing factor MCM7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022676810.1 True 2512 mRNA 0.54 16 34219943 34228034

Neighbor

gene id symbol gene type direction distance location
LOC103041332 NA coding downstream 3616 34213764 ~ 34216327 (-)
crmp1 NA coding downstream 21058 34191147 ~ 34198885 (-)
LOC103038859 NA coding downstream 29549 34185628 ~ 34190394 (-)
cytl1 NA coding downstream 83371 34134586 ~ 34136572 (-)
stx18 stx18 coding downstream 116569 34090634 ~ 34103374 (-)
G15519 NA non-coding downstream 4647 34212863 ~ 34215296 (-)
G15516 NA non-coding downstream 24715 34194775 ~ 34195228 (-)
G15513 NA non-coding downstream 41376 34177201 ~ 34178567 (-)
G15512 NA non-coding downstream 44565 34174200 ~ 34175378 (-)
G15510 NA non-coding downstream 52041 34167542 ~ 34167902 (-)
G15523 NA non-coding upstream 5595 34233629 ~ 34234463 (-)
evc2 NA other downstream 47926 34151823 ~ 34172017 (-)
G15497 NA other downstream 83211 34134592 ~ 34136732 (-)
hopx hopx,LOC107552340 other downstream 1399139 32814048 ~ 32820804 (-)
nfkb1 nfkb1,LOC106536450 other downstream 2059980 32122222 ~ 32159963 (-)
G14839 NA other downstream 3164440 31053764 ~ 31055503 (-)
G15498 NA other upstream 13292 34241326 ~ 34242318 (-)

Expression


Co-expression Network