Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000009_10555555_10560050 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 10554350 ~ 10560398 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000009_10555555_10560050.mRNA | True | 1841 | mRNA | 0.37 | 4 | 10554350 | 10560398 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_10491868_10508777 | NA | coding | upstream | 45341 | 10491401 ~ 10509009 (+) |
| CI01000009_10477699_10485965 | NA | coding | upstream | 66997 | 10476658 ~ 10487353 (+) |
| CI01000009_10454695_10474253 | SLC12A8 | coding | upstream | 80097 | 10454036 ~ 10474253 (+) |
| CI01000009_10445879_10449126 | ZNF148 | coding | upstream | 105100 | 10445879 ~ 10449250 (+) |
| CI01000009_10427119_10442186 | SNX4 | coding | upstream | 112099 | 10427119 ~ 10442251 (+) |
| CI01000009_10583435_10617169 | MAP2 | coding | downstream | 23037 | 10583435 ~ 10617169 (+) |
| CI01000009_10644080_10691030 | CPS1 | coding | downstream | 83682 | 10644080 ~ 10692050 (+) |
| CI01000009_11342784_11347580 | NA | coding | downstream | 782386 | 11342784 ~ 11348827 (+) |
| CI01000009_11434018_11455253 | NA | coding | downstream | 873394 | 11433792 ~ 11455635 (+) |
| CI01000009_11493236_11526914 | VWC2L | coding | downstream | 932838 | 11493236 ~ 11526914 (+) |
| G56567 | NA | non-coding | upstream | 20625 | 10518816 ~ 10533725 (+) |
| G56579 | NA | non-coding | upstream | 41710 | 10512413 ~ 10512640 (+) |
| G56564 | NA | non-coding | upstream | 200666 | 10352929 ~ 10353684 (+) |
| G56393 | NA | non-coding | upstream | 249865 | 10303482 ~ 10304485 (+) |
| G56540 | NA | non-coding | upstream | 261791 | 10290459 ~ 10292559 (+) |
| G56548 | NA | non-coding | downstream | 70700 | 10631098 ~ 10638452 (+) |
| G56594 | NA | non-coding | downstream | 135328 | 10695726 ~ 10696013 (+) |
| G56628 | NA | non-coding | downstream | 155212 | 10715610 ~ 10715888 (+) |
| G56633 | NA | non-coding | downstream | 161496 | 10721894 ~ 10722336 (+) |
| G56695 | NA | non-coding | downstream | 270594 | 10830992 ~ 10860154 (+) |
| CI01000009_09853929_09854476 | SAP18 | other | upstream | 697763 | 9853929 ~ 9856587 (+) |
| G56100 | NA | other | upstream | 1424064 | 9129300 ~ 9130286 (+) |
| G53651 | NA | other | upstream | 4305958 | 6245564 ~ 6248392 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | upstream | 4621549 | 5931718 ~ 5943899 (+) |
| G53388 | NA | other | upstream | 5015296 | 5522242 ~ 5540638 (+) |
| CI01000009_11761868_11765848 | ORMDL1.S, ORMDL1 | other | downstream | 1200388 | 11761606 ~ 11766944 (+) |
| G57811 | NA | other | downstream | 1373544 | 11933942 ~ 11935251 (+) |
| CI01000009_12432736_12435509 | NA | other | downstream | 1872160 | 12432538 ~ 12436017 (+) |
| G57682 | NA | other | downstream | 2265071 | 12825469 ~ 12892339 (+) |
| G57691 | NA | other | downstream | 2346046 | 12906444 ~ 12918465 (+) |
