LOC103044149 (LOC108427384,LOC108427383,LOC100528069,LOC108427382)


Basic Information

Item Value
gene id LOC103044149
gene name LOC108427384,LOC108427383,LOC100528069,LOC108427382
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 15700494 ~ 15705807 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677486.1
GATCATAAAAGTTAGCGCGAGCAGCAGGACTGAACAGAGGTTCTCGGGTCAACAGTGATTGGACGGAACTTCCGCGCGCGGTTTTTCCCTCAGTTTAGActttattttaatctgtttaacagaaataaacatcAGGAGACATGCAGGCATCCCAGATCCGCCAGAACTACCACTATGACTGCGAGGCTGCGGTCAACAGGATGGTGAACCTGGAGCTGAGCGCATCCTACACCTACACCTCACTGgccTTCTACTTCTGTCGGGATGATGTAGCCCTAGAAGGTTTCTCCCATTTCTTCAAGGAGAACTGTCACCGTGAGCATGCAGAGAAGTTTATGGAGTTCCAGAACAAAAGAAGTGGACGTATCTTCCTCCAGGATATTAAGAAACCTGAACATAATGAGTGGGGAACAGGACTGGAGGCCATGCAGTTTGCTCTGCAGTTGGAGAAGAAGGTTAACCAGGCTCTGCTGGACCTGCACAAGATTGCTACTGACAAGGAAGACCCTCATCTGTGTGACTTCCTGGAGTCTCACTACCTGAAGGAACAGGTGGAGCTCATCAAGAAGCTGGGTGATCACATCACCAATCTCACCAAGATGGACGCCTCCAACAACAAGATGGCCGAATACCTGTTCGACAAGCACACCCTGGAGAGCTAAactaaatattcatatttacaaATTCTATTATGAAATCCACCTGAAATAAATTGAATAtgcaaaattaaatgaaaaagatGAAGAGAAGTTGAAATGTGGGGCAGATTTACTTTGTGATTGTCTTGTCAAACTTTATAGCACTGCAGGACACTGTGGTGGTATCATAGTCATAATATGCAGGTTTAAACCTAAAAGAATCTGACAAATAAACATTCTGAGGTGGA

Function

NR:

description
PREDICTED: ferritin, middle subunit-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677486.1 True 886 mRNA 0.45 4 15700494 15705807

Neighbor

gene id symbol gene type direction distance location
LOC103029096 LOC108427383,LOC108427382,LOC108427385,LOC100528069 coding downstream 16979 15681200 ~ 15683515 (-)
LOC103029400 LOC108427383,LOC108427382,LOC100528069,LOC108427385 coding downstream 26873 15671756 ~ 15673621 (-)
LOC103027827 syt5a,LOC108427381,LOC107658481,LOC107583026,LOC107730742,LOC107548337 coding downstream 35123 15648284 ~ 15665371 (-)
ap2a1 ap2a1,LOC103373570,LOC104937940,LOC103131521 coding downstream 430689 15228919 ~ 15269805 (-)
LOC103047588 LOC107579758 coding downstream 474975 15219759 ~ 15225519 (-)
LOC103038450 LOC108427385,LOC100528069,LOC108427383,LOC108427382 coding upstream 6008 15711815 ~ 15713440 (-)
aldh16a1 aldh16a1 coding upstream 17178 15722985 ~ 15738813 (-)
LOC103031937 NA coding upstream 204584 15910391 ~ 15928693 (-)
LOC103032263 lin7b,LOC107693502,LOC107730776,LOC107658474,LOC107548331 coding upstream 230715 15936522 ~ 15942544 (-)
snrnp70 snrnp70,LOC106583923 coding upstream 247037 15952844 ~ 15964476 (-)
G10962 NA non-coding downstream 11289 15668875 ~ 15689205 (-)
G10811 NA non-coding downstream 420566 15279453 ~ 15279928 (-)
LOC111194139 NA non-coding downstream 611366 15087871 ~ 15089128 (-)
G10782 polr3d non-coding downstream 680379 15019291 ~ 15020115 (-)
G10654 NA non-coding downstream 928876 14771330 ~ 14771618 (-)
G10989 NA non-coding upstream 184266 15890073 ~ 15890647 (-)
G10996 NA non-coding upstream 237550 15943357 ~ 15943893 (-)
G11000 NA non-coding upstream 245127 15950934 ~ 15951171 (-)
G11008 NA non-coding upstream 301128 16006935 ~ 16007794 (-)
G11013 NA non-coding upstream 313821 16019628 ~ 16020852 (-)
LOC111188178 NA other downstream 413759 15285676 ~ 15286735 (-)
G10808 prmt1,LOC107729532,LOC107658485,LOC107689671 other downstream 422057 15272755 ~ 15278437 (-)
LOC103043825 pax10,LOC108427317,LOC107689663,LOC108280587,LOC107557340,LOC107579793 other downstream 718925 14960832 ~ 14981569 (-)
G10767 NA other downstream 776535 14922965 ~ 14923959 (-)
LOC103040656 LOC108427315 other downstream 902851 14788070 ~ 14797643 (-)
LOC103030038 kcnc3a,LOC108427388,LOC107729449,LOC107693499,LOC107548332 other upstream 52949 15758756 ~ 15902433 (-)
strada strada,LOC107693497,LOC107658471 other upstream 273430 15979237 ~ 16004719 (-)
LOC103036671 LOC108427400 other upstream 615771 16321578 ~ 16353834 (-)
G11719 med13,LOC108435287,LOC107586266,LOC107726096,LOC107597541 other upstream 3402906 19108713 ~ 19111572 (-)
LOC103042450 dyrk1a,LOC107662773,LOC107586271,LOC107726100,LOC108435291,LOC107597536,LOC107729114 other upstream 3535949 19241756 ~ 19273854 (-)

Expression


Co-expression Network