prr12 (prr12,prr12b,LOC107729421,LOC107658420,LOC107689691,LOC107730729,LOC107554076)


Basic Information

Item Value
gene id prr12
gene name prr12,prr12b,LOC107729421,LOC107658420,LOC107689691,LOC107730729,LOC107554076
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 15136544 ~ 15172432 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677535.1
ctctcacactctcactctctctctcccccctccgAGCTGCTCCCATTCTTGAGGACTTGCATGTGAAACGGGAGAGATAAACAGACGTGCGGAGAGCGCCGAGGAAAGGacaaggggagagagagagagagagtgagagagagagtgtgagagagagagagagagagacggtgcATTAGAATTTAGGAAACAACCTCCCTCCCCTCTCCTCccctctccacctcctcctccttctcctcctcctcctcctgccccCCTCCTTCCTTGTCTATCTCTCCATCTTCATCCCtcgttcttttttctttaatggaTAGGAATTATCCTGGAACAGGATTCGGAGATCTGGGAGCAGGAACGGGATGGAGTTACGAGAGATCAGCGAAGGCAAGTCTGATGTATGGGAGCTCCAGATCCTCCCATCCGGACTCAGAACTACTCCATCGTCAAGCTTACACAACACCACACCCCCTGCAGGGCTATGCAACCAATCATCACCCAGGAAGCTCTGGGCAGGGTGGAGCGTGGGGAGCAGCTGGCCGGAGTTTAGGACTTTCAGGTTTGTTTGATGCTGGGTTGCACCATGCGAGCTCATCGGGGCCTGACGCTTCCGTCATGAACCTGATCTCTGCATTGGAATCTCGAGGTCCACAGCCTCCCCCTTCagcctcctctctcctctctcagttCCGTACCCCCTCTTGGCAGACTGCAATGCATACTCCGGCACCTGCTGAGCTCTTCATCTCTAGCGCACTGCCTGGGTCTGGCTCCTTCCCCTCTTCCTCCGCCCTGTCAGCATATCAGCACCCTGCTTCGTTCTCAGGTCgctcctttcctggggtgacCCCATCACTATCTCTCCAAGACACTCCGACCTTCAGCCCCACCTCTAATGGCCTCCTGTCACCACATGATCCTCTGCTGCACATAAAAACACCATCCCAGTCCAGTCTGGGCTTTGACCGCCTTCTTTCCTCCCAGAGTGCGGCGTACAGAGGAGCTCAGGAGGCATCCAGTGCTCCCCAACCTCCCCCACAATcgtcctcatcctcctcctctcgcCACTTACCTCCCCCACAGTTTAACCTGCTCTCATCACAGCTTCAAGACCAGTCCTCCCAGCTTTACAATGCCTCTGTATTCTCCTCAGCACCTGCTCCCCCACAGGCCCCTACCCCCCAAGAAAGAGCCATTCCCAGACAAGACAGTGTGATAAAGCACTATCAGAGACCTTCCCCTGCACAGTCCCAACTGTCCTCTTCTACACCACATCCCCTGCAACATTATCTTAGCTGTGGAGCATCAGGGTACCAGCAGATTTCCCACCATCGGCATGGCGGAGTTAACTGTAGTCCTCTGGGTGAACAAAGTCCATCCTCTGACCCTAAACCCTCACCCCGGTCAGAGCAGGTTTACCGGCCCATAATACAGCCCCCATACAGCTCCTCCACAACATCTTCATCAGCTTCCACAGGAGGCAGTATTGGGAAAACAGGAAAGAGTTCTAGTTCAAGCAGTGGCTACTCTTCCTCCAGCTCTTCTTCATCAAGGACTCCCCACACACCCCCCTCAGCTTCCTCcacttcttcctcctcctcttcttcatctaACCCCAGTGCATCATCTAGCTCCTCCTCGGCTCCTTCAAGGCAGCAGCCACCACCCCAGACTGCACCTCAACCCCCTCCgccacctcctccacctccccctGTATCCTCTTCTGCAACACAACAGCCTGCTCCCAAACCCTGCCTTTCCGCATATGGTTCTCCTGTAGCTCCTGTTAAACCTGCCTCTGGGCTCCCTGGTCAAACCCCACCACAGCAACACTCGCAATCATATTCTCCAGGCCAACCCCCATCTTCCCATATGTCCCAGCCTTATGGAGGATTCAGCTCCCCGCAGGCCCAGGATCTTAGCTCTGGTCCTGGGGGGTCAGGAAAAGGTTTTGGGGGTCTAGGAGCAACAGGGCGTTCATTTTCAGCAGAGGTGGTGTATGGATCTGAGTCAGGGTATGGTTCTTTACCACCATCTCTTGGAGGAGCAGGAAGTCCCTCAATGGGCTATGGTGGTCCTGGACATTCACCTGCTCTAATAGGGTCTGGAGGGGGAACAGGTACAACAAGCAGTGGTGCTGGCTCAGGAGGTGGTAGTTCAGGGGGTGCAGGTCCTGGCAGTAACAGTGTTGCAAGTGGTGGAGGATCATACCATCTACCGGACTCCAGCCCATCCCCCTCAAGTAACTCTGGAATCATTCGGCCAGGATTACATTCCCCTGCCCCAACTCGTCCTGCTCAGTCTCCAGGAGGAACTGGGGGTAATAAGTATCTCTCCTCAGTTCTCTCTCCTGCTTTCTTAGCATCTCCACAGGGGTACTCAGACACACGAGCCCCTCAACCCCAAACACAATCTTATCATCCAGCTCCACCGAAATCCAAGTCAGAGTCTGAAATGCTCGGTATGGAACGATCCCAAGAGGATGATGAAGACGATGATGACGATTTTCTAATTCAGCACTTATTGCACTCTCAGAGCCCAGCCCCTCCCCCCTCTCAACACCACACTCAACAACAGCCACCACCCGTCCCTACCCAGCAGCAATCACAGTCCCAGTCTGTGACCCAAAGAGGGGATGGAGCAAAGGGAATGTCAGCATATGAACTGAACAAGGCATCTGAGGAACGCTATCATTTACAAAGTGTAATTCGCACGAATAATGCCACCAATAATGTGGCTCCTGGTACTGTGAACACCACTGGACCAAGCACTGGTTCAGAGAGTCAGATGGAGATGTCTCTGaagaagcagcagcaacaaGCAAAAGCAGATAGACCAGTCTCCAGAGCTGGGACCAACGGAGGGAGAGGGGGAATggattcactctctcactctcattcccATGTACCTCACTCTCACCAACATGACTCTCTGGGCTCAGTGGTCCACTATGGGAGAGGGGACCCTTACGGCCACCAGACACACCAACATCAGCATCACTCTTCGCACTCCTCACACCCACAGCACTCCCAACATACACAGCATTCGCATCCACATTCCATGTCTCACTCCCACATGGACCTCAAGGAAGCTCCAGATCCATCAGAGCTACCATATTTGCGCAAAACCCCAGATTTGCAACAGCGACAGTCCCAGACTTCTCTTTCCCATATGGATTCACCACCTGACCAGACTCAGCAACCTCAGCAGGCTCACCTTCTCCAGTCTGTTCTTTCTCACACCACAGGTAACAAGCTTGACACTCAGCAAACCTCCCAACAACAACAGCACCCAATGAGCCAACAGGCTTTAATGGGACCAAGTGGAGGTCTTGGGACTGCTAGTGGCGGGGGAGTGGAGTCCCAGCCACAAGCCTCtcagcttcagctccagcttcaATCCCAGGCAATGGAGGCTCACTATGGGCGTGAAGCACAGCGAAACCAAAGTCAGTCTAGTCAGAATTCTGTCTCACCACTAGATATGCTTGAGCGGTCACTATCAAGGACAAACAGTCGTGAAGGGACAGGGCCTACTGAGAGAATTGTTGGTGGAGATGGAAGCACCAGTGAACACCATAGaccacagcagcagcaacagctgcagcaacaacagcagctGCAACAGCAAAGGATACCCTCACATCACCAGTCCCACCATCCTCAACAGCCACCTTCAGAGCTCGATTTCCTAAGCGAGACAAATCTGAGTATGTCAACCTCATCTCATCTGCATCATATGGCTTCACACCATACACACCCTCATGCCCACCACCAGCCACAGCCCCACCCTCATCACCAACACTCTCACCAGCTCTCTCATCACATGACAGCCAACTCTGCACCTTTGCAGCCTCAGGCACAGCCTAGAGAACCAGAACCCCAGCTCACCCAGACACAACTTGATCAGCTCAAAGAACACCAGTTTGACACAGAAAGCCCTGTAGGGAAACCAACACAGAATCAGGGATCGagccagcagcaacaacaacaaaggtTTGTACCTCTGACCTCCATCTGTTTCCCTGACTCACTCCTCCAAGATGAAGATCGGTCATTTTTTCCAGGAATGGAAGACATGTTCTGCTCCGAAGACTACAAGCCAAGCTGTGCAGGAGGAGGTGGTACTGGACAAGGAGATCAGGATATGGTGTCTGAAGGGCGTGTAAACGTTCAAGATGGAATAGAGTCAGTTAAGACCGGCGGAGGGGCAGGTGGATATGATATGATGGGTCACCATAGTGACCAGGGGTATGGGCAGTACTGTCACAGTCTTGCTGAATCCGGCAATGGTAGCATGCATCTTGATTTAGACTCTCTGAAAACTCATGAACTCCCATCCACTGTGAACACAGAACAACTGGGCCTGATACAGTCTCAGGCCCCAGGCATCGGAATGGGTGGCACAGGACCTGGTGTAGATGGAACAGGGAACAAAATGATGGGAACTCCAGGTGTAGGAAGTGGGTCTGGAACAGGTGGGTTGACTTCACCCATTTTCTGCTCTTCTAGACCCAAAAAACTACTAAAGACCAGTTCTTTCCACCTTCTGAAACAGAGGAGAGATCCCAATTCCCAGCCACAGACAAAGAAAACGTATGCCCAGGAATATGAATTTGAGGACGATGAGGATAAAGCAGATGTTCCTGCTGACATTAGACTCAACAGCAGGCGTCTGCCAGATTTGCTCCCTGATTTGGTGTCTAGCTGCCGCAAGTCCAGTGGCGGTTCAGGGGTTGGTAGTCTCAGTCCCTTAATAGGTGACTTAGATTTCTGCCACCCCTCAGGGTACCCGTCTCTTGGACCACCTCCACAGCTGCTTCCCCAAGATGGACCAAAGAAGAGGGGCAGAAAGCCAACAAAACCGAAACGAGAAGGTCCCCCCAGACCCAGGGGAAGACCCCGTATTCGTCCATTACCAGAACCTCCTTATTGCAGAGGTCTAATGGGATCCAATGCTGGGGAGAGCCGAAGGGGACGCGGTCGAGGAAGAGGTCGTGGCAGAAAAGACGATCTCATGTTGGAAATGCATAGAGACATGAATAAAGGACAGAATTATCAACAGCCTCATCAACAAGCACCTCATCTCCATCACCAACAACAGCTTCAGCAGCAACATCAACCACAACACTTGCAGCAACATCTGCACCACCATCAACAGCCCCAGCAGCATCTACAACCGCAGCAGCAACACATGCACCAACAACAGCACCTACATACACAACACCATCAACAACAGCTacatcaacagcagcagcatcacCAACAGCAACCACAGCACCAACAACACCAACAACATCCCCAACAACATCAGCCTCAACAACAGTATCAGGAACCTATCAAACCAATCAAGATCAAGCTCCCTCTTCCTTCCATTCCTTCATCCGAGTCGCTCTTGAGGACGGACTCCTTGTCGAGCACAGATCCAGTTCTCTCTGATGGCTCTGTAGGGTCTGCTCCATCTTTAGGCCTGAGCCCTGGGCCCACATCTGCACTGGACATGAACAGAGCAGATTTGAATCGAGTTCAGGAGAAGATGGCAGAGAAGGATCAAGAGATGTCCTGGGAGAGAGACATGGATGAAGACATGACCCCAGAGGCCTGGGCTACCATGCAAAAACTGTCGAGCTCAACTGACGAGAAGCCCCCAGAGCTGAAGTCTGGCTTCATAACTTCTTTCTTGGATTTCCTGAAAACTGAAAAGAAGCAGCCAGGCCCTGGTGTGCCATCCATGGATGGCTCCACCCCCACAGATGACCACTCTGTGAAAGGCGGGATCCGTCCTTTATCTCCACCGCCGCCTCCTCCACCACCGCCTCCTCCACCGTCGTTCGGAGAAAGTGAGGGCGAAGGGAGCCTGGCTCTCAGCAACTGCCCGTCGCCGTGCAAACGCCTGGACGAGGAACTAAAGAGGAACCTGGAAACGCTGCCTTCCTTCTCCTCTGACGAGGAGGACTCTGTGAGCAAAAACCAGGACCTGCAGAAGAGCATCTCCTCCGCCATCTCTGCCCTCTACGACACGCCCCACAGCCTGGCCGCAGTCCCACCCCCTCCCACTCCGTCCCCGCCCACTCCGCAGGACCAGCCCCTGAACACACCTCCTCCGCCTCCTCATTCGCCTCCTCCgcctctccctcactctcacaGCGAACATGAGCACGAAACAGAGGCTTCCATATCACCCCATGACGAGGATCCACACGCACACCTGGAGGTGCAGGAGAGCTTGGGCACGCCTCTCGCTCAGGAGGATGAGGGAGTCATGCAGGACCCAGAGCAGGAGGAGCTACGGGAAGAGGCGGAGCCTGAGAGAACTCCAGAACCTGAGAATGAGGAGGATGAGCCTGAGGAGGAaatgagagaagaagagaatgtagtgcagagaggaggagaggagagagagagggaagaaggagaggaggaagatgaagaagatgacaatgaggaggaggaggaagagacgGAGCACAATGTGTTGGGCTCTGCCAAGGGTGATGATTCTCCATCTGAGCCTGTTCCCGCTCCTGCACCGCCTTCTCCTCCATTCTTTTCTCCTTCTCCACcaagctcctcctcctcaccaTCTCCTCTTCCCCCACCTcccctctctcttccctctcctCTTCCTGCccaggaggaagaagaggagacTCCAGAACCCCCGCCATCACCACCGCAACCGCAGCTCCTGTCCCAGTCGCAGTTGCCGTCACCGCCCCACCCGTCATCAAAATCACAGCATCCGCCACAGTCCGTTCCCCTGCACCATCAGTCTCTCCCGCCCAGCCCCTCTCCTCCTGCTCTCCCCTCTCCATCTCCTCCACCTCCCACATTCCCTCCCTCCACCACCCCTCCtccatcctcctctcctcctcccccGGCCGAGGTGCCCCAGCCCTCTCCTCCCTCGCCCCCAACCCCAGAGGATGCCCCGACGCCTCAGATCACCTCTCTCCACCTGGCCAAGAAGCAGGACAACGCTGCCATCGCCGGAGAGAGCGAGGAGGAGGACAGTGAGAGTGGTGGTGAGGGAATCTtcagagagagggatgagttTGTGGTTCGCACTGAAGACATCGGCACACTCAAGCTGGCTCTGCAGACGGGCAGAGAGCCTCCCCCGATATGGAGGGTGCAGAAAGCACTGCTGCAGAAATTCGCCCCTGAGATCAAGGATGGCCAGCGGCAGTTCTGTGCTACTAGCAATTATCTGGGCTACTTCGGAGATGCAAAGATGCGTTATCAGCGCTTGTACGTGAAGTTCTTAGAGAATGTGAATAAGAAGGATTACGTCAGAGTGTGCTCGCGGAAACCCTGGCACAGAGCCGGAATTACGCTCAGGCGTCAGTCACTCCCTAAGCCGACGCCCCCTGTCCAGACTCCGCCCCGCATGGAACGAgaggacagagaaagagagagagagagggagagacagcgagagaaagAGCAGCGGGAggagagggagaaagagagggagagggaaagagagaaggagagggaaaaagagaaagaaagagagcgggaaagagaaaaggagcgggaaaaacaaagagagaaagagcgagagaaagagagagcaaaggaAAGGGAGAAGCAAagggagcgcgagagagagaaagagagggaaaaacagCGAGAAagggaaaaggagaaagagaaggagagagaaaagcagagagagagggagcgagagaaggagaaacagagggagcgagagagggagaagcAAAGAGAGCGGGAAaaagaggagaaggagaaagagagggaaaaggaaaagaagcTCCAGGAGAGGCAGAATCAGGAGAAgctggagaggagaggaggtgtGGAGCGAGGGAGGGcgaaggaggagaagagaggaggaggagcggAGAAGAGGACGGAGAGAGCTCGGAGTCGGCCTGTTAAAGTTAAAGCAGAGCCTCCACCcaagaagaggaagaagtgGCTGAAGGAAGTTCCTGAGGTTCCCTCCTCTGAGTCTGACTCATCACCTGCTAGTGAGGacgaagGCTCACTGCGCAGTGGGTTAAACAGCCGGGCGATGCGTGAGATGTACCGCAGTTACATAGAAATGCTGGTCAGCACAGCACTGGATCCTGACATGATCCAGGCCTTGGAGGACACCAACGaTGAGCTGTATCTCCCACCCATGAGGAAGATTGACAGCATTCTGAATGAACAGAAGCGGAGATTACTGCGGAGGGTCAACATGAGCGCCCAGCACCAGGAAGCTTTGCACATGTTCCCTCAGATGGCTGCTGATGCTCTGGAATCTGGCGCAGTAAAGGTGCGCCTTGGGGGAGAGGGTTACAATCGCAAAACCCTCAACCGTGTTAAAAGGAGTGTTCCTAAGCAACAGgaTCTGAAGCTGTCGACGGAGATGTGTCGGATCTACagtctctatcactctctccaTCATTATAAATATCACACCTTCCTGCACTGCAAAAAGGAGacggACAGTATAGAGCAGGCAGCAGAGGACCCCGGTCAGGAGGAGGTGGTCCAGCAGTGTATGGCCAATCAGGGCTGGCTGGAGACCCTCTTCAATTCCTTCATCGAGCTGCTGACCCTGAGCAACAAGGCTTAGGGTGGGTGGAGGTTTAAAGCGTGCTTCGTGTTGGAAGCATGGACTGAACCATTTGCAGACGCCAGAGCGGCAGGAAGTCAGAATGTACCATTTTTCCTAacacggtgtgtgtgtgaggagcaaAGCAGTGTTCTGGGCTGTTGCATCGtaacttgaaaatgttttaatttttttttttctgtgacacTTTCCATTttccttttacttttttcttttctttttttgtatcatgTAAAAACTCCTCAGtggaagaggagaaaaaaatgaagcagagtgaaacgtgagagagagagagagagagagagagagagagtgagagagcgacagagagagagtgagagcgagtGAGAATGTGTGTAGATGAAGAAGGATAGAGTCTGTGCCAATGTGAACAGGGTTTGAGCCTCTCGGGCCTTCTGCAGCTTCTGGCGGAGGGGAGCTTTGAATGCTATGTTCCACGCACactcttaaatatataaatatgtattattgaTAATTatgatttgtattatttatacaagGACGTTTTTAAAACAAGTACACCTCCCCTTACACAGGCAAAACGCTGGGGCAGTTTCCTGTTATTATTTtgaataatgatgataataatactCCTGTTTTATTAGGGTGTACATAAAATGGCCTACTAACTGCTCCTCCCGGCCCCCCGAAACAAACTAAAGGGGGAAAAAACGGTGGGGATCCGGACATCCATGGACTTTAAGGGGAGtctaagctgtgtgtgtgaagtcATTTTTGTTctcggaaaaaaaaaagagcgagggaaaatgtatttaaagtcaAAAAGACGTGTTCTTTCTGTTTGTTCttctaaagaaaaagagaaaaagtggcGTATCTCTTCGTTTTCTCCAAGAAAGCGTGATGGTGCAGAGGGAtgtaaccatttttaaagtgtgaaatcgtctgtgtttgtttttttttatctgttggTCGTTTACTATGATaattattcttcttattattataattataattattattttggaggTTTGCCCATTCATTTGATCTCTTTGTAAATATTGTACAGCTGCTTCAGTCTCAAGCTCCCAGTCCCTCATCTGACCATGAGCCCTCCTGTATTTGACAAacgcaaataaaaaaacagacaacgTTCAAACGTTCAATGAAAATGGTGGGAAAACCAGCAAACCTGa

Function

symbol description
prr12b Orthologous to human PRR12 (proline rich 12).
prr12 Predicted to be located in neuron projection; nucleus; and postsynaptic density.

NR:

description
PREDICTED: proline-rich protein 12

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677535.1 True 9767 mRNA 0.52 17 15136544 15172432

Neighbor

gene id symbol gene type direction distance location
LOC103041971 LOC103041971 coding downstream 21073 15113469 ~ 15115471 (-)
scaf1 scaf1,LOC107658492,LOC107583012,LOC106583916 coding downstream 23890 15099039 ~ 15112654 (-)
LOC103041664 LOC108427365 coding downstream 49331 15046467 ~ 15087213 (-)
LOC103044148 LOC108280579,LOC108427364,LOC100007086 coding downstream 97487 15029186 ~ 15039057 (-)
nosip nosip,LOC107658495,LOC107729514 coding downstream 122777 15004815 ~ 15013767 (-)
prrg2 NA coding upstream 1965 15174397 ~ 15182700 (-)
rras rras,LOC107730736,LOC107658490,LOC107583016,LOC107554112 coding upstream 22431 15194863 ~ 15208007 (-)
LOC103047588 LOC107579758 coding upstream 47327 15219759 ~ 15225519 (-)
ap2a1 ap2a1,LOC103373570,LOC104937940,LOC103131521 coding upstream 56487 15228919 ~ 15269805 (-)
LOC103027827 syt5a,LOC108427381,LOC107658481,LOC107583026,LOC107730742,LOC107548337 coding upstream 475852 15648284 ~ 15665371 (-)
LOC111194139 NA non-coding downstream 47416 15087871 ~ 15089128 (-)
G10782 polr3d non-coding downstream 116429 15019291 ~ 15020115 (-)
G10654 NA non-coding downstream 364926 14771330 ~ 14771618 (-)
G10649 NA non-coding downstream 427931 14707333 ~ 14708613 (-)
G10595 NA non-coding downstream 441650 14692782 ~ 14694894 (-)
G10811 NA non-coding upstream 107021 15279453 ~ 15279928 (-)
G10962 NA non-coding upstream 496443 15668875 ~ 15689205 (-)
G10989 NA non-coding upstream 717641 15890073 ~ 15890647 (-)
G10996 NA non-coding upstream 770925 15943357 ~ 15943893 (-)
G11000 NA non-coding upstream 778502 15950934 ~ 15951171 (-)
LOC103043825 pax10,LOC108427317,LOC107689663,LOC108280587,LOC107557340,LOC107579793 other downstream 154975 14960832 ~ 14981569 (-)
G10767 NA other downstream 212585 14922965 ~ 14923959 (-)
LOC103040656 LOC108427315 other downstream 338901 14788070 ~ 14797643 (-)
hsd3b7 hsd3b7,LOC106601563 other downstream 479983 14619376 ~ 14656561 (-)
G10560 NA other downstream 892750 14241061 ~ 14243794 (-)
G10808 prmt1,LOC107729532,LOC107658485,LOC107689671 other upstream 100323 15272755 ~ 15278437 (-)
LOC111188178 NA other upstream 113244 15285676 ~ 15286735 (-)
LOC103030038 kcnc3a,LOC108427388,LOC107729449,LOC107693499,LOC107548332 other upstream 586324 15758756 ~ 15902433 (-)
strada strada,LOC107693497,LOC107658471 other upstream 806805 15979237 ~ 16004719 (-)
LOC103036671 LOC108427400 other upstream 1149146 16321578 ~ 16353834 (-)

Expression


Co-expression Network