CI01000009_10631280_10637275 (MYLZ3, MYL1)


Basic Information

Item Value
gene id CI01000009_10631280_10637275
gene name MYLZ3, MYL1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 10631086 ~ 10637275 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_10631280_10637275.mRNA
ATGGCACCCAAGAAGGACGCTAAGAAGCCCGAACCCCCCAAGAAGGCAGAGCCCGCACCTGCCCCCGCTCCCGCAGCCGCACCTGAGGCCCCACCTAAGCCCGCCGCAGTAGATCTGTCCGGTGTGAAGCTCGATTTCAGCCAGGACCAGTTGGAAGATTACAAGGAGGCCTTCGGACTTTTCGACAGAGTTGGTGACAACAAAGTAGCCTACAACCAGATTGCAGATATCATGCGTGCACTGGGACAGAACCCAACCAACAAAGAGGTTTCAAAGATCCTGGGCAACCCCACCGCTGATGACATGGCAAACAAGAGAGTCGACTTTGAGGGTTTCCTGCCCATGCTGCAGTTTGTGGTCAACAGCCCAAACAAGGCAACATATGAAGACTACGTTGAGGGTCTCCGTGTATTCGATAAGGAGGGCAACGGAACAGTAATGGGTGCTGAGCTGCGTATCGTCTTGTCAACACTGGGTGAGAAAATGACTGAAGCTGAGATCGATGCTCTTATGCAAGGCCAGGAGGATGAAAATGGCTGTGTGAACTATGAGGCTAATTTTCTTGGTGATGTTCGTGTCGGGACAAGCCTCTCCATAGCGGAACGACTGTGAGGGGCGGGGTGTGGGTGTGGGGGGGGCTTCATGATTACACAAAAATATAAACCACCCCCTTGACCCCTCACTGTCTGGATCGCAAAGTCAAAGGTGCTAAATATACTGCCATTAATGGACTGGCTGCAAAACCTCCTTCCCCCTTTCCCCAGAGTCTTAATTTATTTTTCGCCTCTGTCAATTCTCATAATAAA

Function

symbol description
mylz3 Predicted to enable calcium ion binding activity. Is expressed in musculature system; pectoral fin; and somite. Orthologous to human MYL1 (myosin light chain 1).
myl1 Predicted to enable calcium ion binding activity. Acts upstream of or within skeletal muscle tissue development. Is expressed in adaxial cell; fin; musculature system; and somite. Orthologous to human MYL1 (myosin light chain 1).

NR:

description
fast skeletal myosin light chain 3

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K05738 MYL1; myosin light chain 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_10631280_10637275.mRNA True 806 mRNA 0.51 6 10631086 10637275

Neighbor

gene id symbol gene type direction distance location
CI01000009_10414678_10421940 NA coding downstream 209146 10413808 ~ 10421940 (-)
CI01000009_10355985_10360375 CYP27A7 coding downstream 270711 10355735 ~ 10360375 (-)
CI01000009_10330884_10337327 NA coding downstream 293759 10330780 ~ 10337327 (-)
CI01000009_10305247_10317487 NA coding downstream 313342 10305177 ~ 10317744 (-)
CI01000009_10297628_10300270 NA coding downstream 329984 10297628 ~ 10301102 (-)
CI01000009_10762456_10773627 NA coding upstream 124027 10761302 ~ 10774912 (-)
CI01000009_10795119_10827802 ERBB4B, ERBB4 coding upstream 157798 10795073 ~ 10827936 (-)
CI01000009_10830928_10886836 ERBB4, ERBB4A coding upstream 193653 10830928 ~ 10886836 (-)
CI01000009_10925943_10927369 ERBB4 coding upstream 288607 10925882 ~ 10928279 (-)
CI01000009_11030714_11032123 NA coding upstream 393400 11030675 ~ 11035630 (-)
G57349 NA non-coding downstream 118439 10512416 ~ 10512647 (-)
G57283 NA non-coding downstream 188168 10439448 ~ 10442918 (-)
G57311 NA non-coding downstream 312097 10318719 ~ 10318989 (-)
G57035 NA non-coding downstream 326618 10303445 ~ 10304468 (-)
G57418 NA non-coding upstream 56070 10693345 ~ 10693675 (-)
G57426 NA non-coding upstream 84428 10721703 ~ 10722089 (-)
G57435 NA non-coding upstream 99588 10736863 ~ 10737325 (-)
G57436 NA non-coding upstream 100797 10738072 ~ 10738454 (-)
G57439 NA non-coding upstream 110239 10747514 ~ 10747781 (-)
CI01000009_08858198_08860555 NA other downstream 1770523 8856310 ~ 8860563 (-)
G55814 NA other downstream 2203074 8425821 ~ 8428012 (-)
G53515 NA other downstream 5125838 5502395 ~ 5505248 (-)
G52828 NA other downstream 6399617 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 7369129 3261038 ~ 3262843 (-)
G59097 NA other upstream 1650942 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 3338113 13975099 ~ 13978614 (-)
G59490 NA other upstream 3396289 14033564 ~ 14037873 (-)
G59811 NA other upstream 4225122 14862397 ~ 14887464 (-)
G59941 NA other upstream 4494829 15132104 ~ 15132503 (-)

Expression


Co-expression Network