LOC103034230


Basic Information

Item Value
gene id LOC103034230
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 21518007 ~ 21530745 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677703.1
AGACAGCAGACTGAGGCTGCAGTGGAGTGGAAGCACCAGCTCTGGTGAAAACGGCGTCTGAAAAGGTGAAGCTCTGAAGTGAACATGTCTCAGCACTGGGAGATCTGTCGCTTCTtacCAGTACTAATAGTACTGGGTGTAGTCTTCAGTGCCGATGGATATACAGAAGATCCACTTTATGAATGCTTGCGCGACCCGGACTATGAGGAGCTTTGTAAGATAATAGACCGGGGTCTCCCCCCTACAAAGACCCCTCACAGTGTGGGGATCATCGGTGCAGGAATCGCTGGACTCACTGCAGCTAAGATACTGGAGGATGCTGGACATAAGGTTACAATCATAGAAGCTACTGATCGTGTAGGTGGAAGAATCAGGACCCACAGGATGGCGAACCAGGGCTGGTATGCTGAACTTGGTGCCATGAGGATCCCATGGTTCCACAAgATCCTTATGTCACTTGTATCAAAGATGGGCCTAAAACTGAATCCTTTCATTGAAGAAAACAAcaatacttattattatatcaaCGGTTTGATTGAAAAAACCGACAAAGTGATTGCAAATCCAGATGTGCTGAACTACGATGTAGATGAGCAAGAGAAGGGGAAATCAGCCAGTCAGCTTTTTGACATGACATTGTGGAAGATTAGAGATGATATGAAGAAATATGGCTGCAATGAGACAGTAGAGAAGTATGATTCATACTCTGTTAAGGAGTATTTACTGAAAGAGGGTAATCTGAGTCGAGAAGCTTTGCGTATGATTGGAGACATACTCAACGAGAACAGCTTCTTCTACACTAGTCTGATAGAGACTCTCTACATACAAAAGGATATCAACGATGATACAAAATATTATGAAATCTCAGGTGGCATGGATCACATACCCAAAAAACTGCATGAGAAACTCAACAGTGCAACAATTCATTTTACATCAAATGTCAAACGCATTAGACAGACTGACCACTACGTGACAGTTTCATATCAAGACCGCCAAAACCTCTACGCTTTAACCAACCTCACTTTCGACTACGTTCTGGTGACGGCTACAGCCAAAGCTTCACTCTTCATTGATTTCCAGCCTCCGCTATCAGTCCGGAAGATGGAGGCTCTGCGCTCGGTGCACTACGCCAGCTCCACCAAGGTCGTGCTGAGCTTCAGTGAGAGGTTCTGGGAGAAACAAGGCATCAAGGGAGGAAGAAGCATCACAGATATGCCATCACGCTTCATTTACTACCCCAGCCACAGCTTTCCTGGAGCAGGGGGCGCCCTTTTGGCTTCATACACCTGCTCTGATGATTCCACGCTCTTCCAGGGGGTGCCGGATGATGAGCTGATGGCCATGGTAATGAATGACTTGGTGAAGATCCATGGGGAGGGGATCCGAAAGCTTCACATTGGAGGTGTTGTAAAGAAATGGGCGTTGGATCCTTACAGCCATGGAGCGTTCGCCATCTACACTCCCTACCAGCAGAGTCACTACTCTAAAGATCTGTTCCAGAAAGAGGGGAGGATTCATTTCGCTGGAGAACACACAGCCATGCCACACGGCTGGATGGAGACGGCCATGAAGTCTGCTCTCAGAGCTGCTAAGAACATTAATAGTATTGACGGATAAAAACAAGACCAAATATCATGTAATATCATGTAATCACCAGAGTATGGATTGTAATACATACCTGTAATATTTACCTTTTATACTTACCTTTAATGTTTGTCTTCTAGTGTAGATATTCTGTAGTAATGGGAAGACACACTCCTACACTCCCTAGGGTATACTGTAGAGCACACAGCTAACTCTGACAGGGGGCGTACATGTAGTTAATTTGTAATGGTGTTTATAAGCAAGGCCTGAGATTTAGCTGATTTTAAATCTGTCATTCTTCATCTACTTTCATGGGTTAGCACACACAGTGTGAGCAAGAGGGGCTAGCTCTGGTAGACTCACCTGACCTGGACTcttaggctacattcacattacaagtcACGTTTCTTAAATCCAATGttttgctcagatctgatttgtctatcttgacggttcacattcacaaatgtaagtaagtgatctgtatctgtgtg

Function

GO: NA

KEGG:

id description
K03334 IL4I1; L-amino-acid oxidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677703.1 True 2078 mRNA 0.45 8 21518007 21530745

Neighbor

gene id symbol gene type direction distance location
LOC103030662 LOC108436499 coding downstream 6801 21496598 ~ 21511206 (-)
LOC103030984 NA coding downstream 26885 21483571 ~ 21491122 (-)
sdhd sdhd,LOC107709126,LOC107657257,LOC107670952,LOC107601715,LOC107717284 coding downstream 35603 21474412 ~ 21482404 (-)
bco2 LOC108436497 coding downstream 52575 21457131 ~ 21465432 (-)
sorl1 sorl1,LOC107717255 coding downstream 67812 21317501 ~ 21450195 (-)
LOC103031934 sik2,sik2b,LOC108436519,LOC107657230,LOC107717286,LOC107709128,LOC107586235,LOC108277697,LOC107601680 coding upstream 79409 21610154 ~ 21699039 (-)
LOC107197401 NA coding upstream 175468 21706213 ~ 21720284 (-)
LOC103032573 NA coding upstream 216675 21747420 ~ 21752895 (-)
LOC103036974 drd2,LOC107670954,LOC107586233,LOC107709110 coding upstream 453689 21984434 ~ 22058836 (-)
scn3b NA coding upstream 611025 22141770 ~ 22164569 (-)
LOC111193576 NA non-coding downstream 201302 21312672 ~ 21316705 (-)
G12203 NA non-coding downstream 556248 20960778 ~ 20961759 (-)
G12131 zbtb16,LOC108435307,LOC105903797,LOC108278332,LOC107748597 non-coding downstream 588790 20840206 ~ 20929217 (-)
G12120 NA non-coding downstream 762720 20728643 ~ 20755287 (-)
G12118 NA non-coding downstream 786087 20720642 ~ 20731920 (-)
G12400 NA non-coding upstream 1735 21532480 ~ 21538280 (-)
G12405 NA non-coding upstream 39213 21569958 ~ 21570232 (-)
G12397 ppp2r1b,LOC108277698,LOC108436518,LOC104965971,LOC101167061,LOC103378498,LOC108243526 non-coding upstream 44213 21574958 ~ 21578572 (-)
G12396 NA non-coding upstream 50817 21581562 ~ 21599012 (-)
G12739 NA non-coding upstream 154467 21685212 ~ 21688855 (-)
trnak-cuu NA other downstream 542853 20975082 ~ 20975154 (-)
G11917 NA other downstream 1435565 19998440 ~ 20082442 (-)
jam3 jam3,jam3a,LOC107699899,LOC107597526,LOC107662760,LOC107713445 other downstream 1715684 19785981 ~ 19802323 (-)
LOC103042450 dyrk1a,LOC107662773,LOC107586271,LOC107726100,LOC108435291,LOC107597536,LOC107729114 other downstream 2244153 19241756 ~ 19273854 (-)
G11719 med13,LOC108435287,LOC107586266,LOC107726096,LOC107597541 other downstream 2406435 19108713 ~ 19111572 (-)
G12767 NA other upstream 463062 21993807 ~ 21994751 (-)
LOC111193708 NA other upstream 2008512 23539257 ~ 23553970 (-)
LOC103035686 kmt2a other upstream 2253726 23784471 ~ 23853298 (-)
G13322 phykpl,LOC108439974,LOC108277665,LOC107585546,LOC107743705,LOC107683819 other upstream 2373438 23904183 ~ 23908771 (-)
spcs2 spcs2,LOC107677086 other upstream 3520215 25050960 ~ 25056101 (-)

Expression


Co-expression Network