LOC111194160


Basic Information

Item Value
gene id LOC111194160
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 6278969 ~ 6279690 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002650961.1
cagagagagagacagagagagagaagtttatGAGattcaaCTATCCTGCCAGTAGAGAGAGGATTAAGacgaagagagggagaaaaatgaacaataacgaataataaaaaaaataaaaccacttaAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002650961.1 True 128 ncRNA 0.34 2 6278969 6279690

Neighbor

gene id symbol gene type direction distance location
LOC103042622 LOC108432050 coding upstream 7827 6143092 ~ 6271142 (+)
nudt9 nudt9,LOC107690277,LOC107755585,LOC107729190,LOC107686995 coding upstream 226470 6044912 ~ 6052499 (+)
LOC111193176 LOC108259092,LOC107687002 coding upstream 381060 5895157 ~ 5897909 (+)
dnajc7 dnajc7,LOC107690290,LOC107687006,LOC107755572 coding upstream 551348 5706208 ~ 5727621 (+)
znf385c znf385c,LOC107590592 coding upstream 592117 5539941 ~ 5686852 (+)
LOC103042304 plcd3,plcd3a,LOC108432051,LOC107654535,LOC107581738,LOC107591554 coding downstream 1647 6281337 ~ 6336335 (+)
LOC103044667 LOC103044667,LOC108432054,LOC108432053 coding downstream 103753 6383443 ~ 6394943 (+)
LOC107196803 NA coding downstream 122072 6401762 ~ 6411830 (+)
LOC103045761 NA coding downstream 145604 6425294 ~ 6481238 (+)
LOC103043121 NA coding downstream 482290 6761980 ~ 6805840 (+)
G8355 NA non-coding upstream 183310 6093496 ~ 6095659 (+)
G8343 NA non-coding upstream 256062 6022351 ~ 6022907 (+)
G8333 NA non-coding upstream 282187 5993246 ~ 5996782 (+)
G8332 NA non-coding upstream 285778 5992705 ~ 5993191 (+)
G8330 NA non-coding upstream 287019 5990255 ~ 5991950 (+)
G8450 NA non-coding downstream 132217 6411907 ~ 6413096 (+)
G8451 NA non-coding downstream 134367 6414057 ~ 6415422 (+)
G8499 NA non-coding downstream 273169 6552859 ~ 6553169 (+)
G8501 NA non-coding downstream 274850 6554540 ~ 6554957 (+)
G8509 NA non-coding downstream 352091 6631781 ~ 6634390 (+)
G8287 ttc25,LOC106601019 other upstream 549469 5728922 ~ 5729500 (+)
hcrt hcrt other upstream 939880 5332065 ~ 5339089 (+)
LOC103045997 si:ch211-210g13.5,LOC108441607,LOC107729192,LOC107687011,LOC108256246,LOC107755565 other upstream 950102 5185534 ~ 5328867 (+)
atp6v0a1 atp6v0a1,LOC108444241 other upstream 1476468 4752796 ~ 4802501 (+)
natd1 natd1,LOC107745813,LOC107689058,LOC107661164 other upstream 2349727 3924285 ~ 3929242 (+)
nmt1 nmt1,LOC108432052,LOC102778525 other downstream 77712 6357402 ~ 6376704 (+)
LOC103045148 LOC108432039 other downstream 429395 6709085 ~ 6734703 (+)
LOC103040872 snu13,LOC103040872,LOC101154660,LOC105910236,LOC107573053 other downstream 2159096 8438786 ~ 8441829 (+)
LOC103021541 slc25a17,LOC108412891,LOC107666095,LOC107548713,LOC107743042,LOC566378 other downstream 2184426 8464116 ~ 8485936 (+)
G9074 NA other downstream 2316179 8595869 ~ 8596783 (+)

Expression


Co-expression Network