trnak-cuu


Basic Information

Item Value
gene id trnak-cuu
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 20975082 ~ 20975154 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnak-cuu
gcccggctagctcagtcggtagagcatgaGACTCTTAATCtcagggttgtgggttcgagCCCCACGTAGGGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnak-cuu True 73 tRNA 0.60 1 20975082 20975154

Neighbor

gene id symbol gene type direction distance location
dixdc1 dixdc1 coding downstream 31102 20912594 ~ 20943980 (-)
LOC103025963 cadm1b,LOC108435304,LOC108277410,LOC107699904,LOC107662762,LOC107713448 coding downstream 535533 20067514 ~ 20439549 (-)
vps26b vps26b,LOC103021802,LOC107699898,LOC107748589,LOC107582573,LOC107597524 coding downstream 1191442 19777857 ~ 19783640 (-)
acad8 acad8,LOC107582571 coding downstream 1202466 19764372 ~ 19772616 (-)
LOC103024723 LOC108435297 coding downstream 1334002 19575806 ~ 19641080 (-)
LOC103030049 NA coding upstream 238079 21213233 ~ 21219097 (-)
sorl1 sorl1,LOC107717255 coding upstream 342347 21317501 ~ 21450195 (-)
bco2 LOC108436497 coding upstream 481977 21457131 ~ 21465432 (-)
sdhd sdhd,LOC107709126,LOC107657257,LOC107670952,LOC107601715,LOC107717284 coding upstream 499258 21474412 ~ 21482404 (-)
LOC103030984 NA coding upstream 508417 21483571 ~ 21491122 (-)
G12203 NA non-coding downstream 13323 20960778 ~ 20961759 (-)
G12131 zbtb16,LOC108435307,LOC105903797,LOC108278332,LOC107748597 non-coding downstream 45865 20840206 ~ 20929217 (-)
G12120 NA non-coding downstream 219795 20728643 ~ 20755287 (-)
G12118 NA non-coding downstream 243162 20720642 ~ 20731920 (-)
G12115 NA non-coding downstream 251170 20689335 ~ 20723912 (-)
LOC111193576 NA non-coding upstream 337518 21312672 ~ 21316705 (-)
G12400 NA non-coding upstream 557326 21532480 ~ 21538280 (-)
G12405 NA non-coding upstream 594804 21569958 ~ 21570232 (-)
G12397 ppp2r1b,LOC108277698,LOC108436518,LOC104965971,LOC101167061,LOC103378498,LOC108243526 non-coding upstream 599804 21574958 ~ 21578572 (-)
G12396 NA non-coding upstream 606408 21581562 ~ 21599012 (-)
G11917 NA other downstream 892640 19998440 ~ 20082442 (-)
jam3 jam3,jam3a,LOC107699899,LOC107597526,LOC107662760,LOC107713445 other downstream 1172759 19785981 ~ 19802323 (-)
LOC103042450 dyrk1a,LOC107662773,LOC107586271,LOC107726100,LOC108435291,LOC107597536,LOC107729114 other downstream 1701228 19241756 ~ 19273854 (-)
G11719 med13,LOC108435287,LOC107586266,LOC107726096,LOC107597541 other downstream 1863510 19108713 ~ 19111572 (-)
LOC103036671 LOC108427400 other downstream 4621248 16321578 ~ 16353834 (-)
G12767 NA other upstream 1018653 21993807 ~ 21994751 (-)
LOC111193708 NA other upstream 2564103 23539257 ~ 23553970 (-)
LOC103035686 kmt2a other upstream 2809317 23784471 ~ 23853298 (-)
G13322 phykpl,LOC108439974,LOC108277665,LOC107585546,LOC107743705,LOC107683819 other upstream 2929029 23904183 ~ 23908771 (-)
spcs2 spcs2,LOC107677086 other upstream 4075806 25050960 ~ 25056101 (-)

Expression


Co-expression Network