trnal-uaa


Basic Information

Item Value
gene id trnal-uaa
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 537815 ~ 537897 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-uaa
accagggtggccgagtggttaaggcgttGGACTTAAGATCCAATGGACAAATGTCTgcgtgggttcgaatcccactcCTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-uaa True 83 tRNA 0.53 1 537815 537897

Neighbor

gene id symbol gene type direction distance location
trnal-caa NA coding upstream 4603 533130 ~ 533212 (+)
trnal-uag NA coding upstream 4962 532771 ~ 532853 (+)
LOC111193013 NA coding upstream 9815 514280 ~ 528000 (+)
LOC103047457 NA coding upstream 130679 400970 ~ 407136 (+)
LOC103034757 LOC108436653 coding upstream 172099 314848 ~ 365716 (+)
LOC111193015 NA coding downstream 2422 540319 ~ 549742 (+)
gtpbp1 gtpbp1,LOC107582974 coding downstream 16282 554179 ~ 571578 (+)
LOC103025552 nacc1,LOC103025552,LOC107690702,LOC107737738,LOC103910274,LOC107554144,LOC107689628,LOC105892190 coding downstream 538085 1075982 ~ 1103227 (+)
ier2 ier2 coding downstream 579604 1117501 ~ 1119058 (+)
alkbh7 NA coding downstream 791345 1329242 ~ 1335034 (+)
G6895 NA non-coding upstream 156875 380604 ~ 380940 (+)
G6876 NA non-coding upstream 338035 199397 ~ 199780 (+)
G6851 NA non-coding upstream 338851 188135 ~ 198964 (+)
G6852 NA non-coding upstream 340901 196620 ~ 196914 (+)
G6843 NA non-coding upstream 383415 138624 ~ 154400 (+)
G6928 NA non-coding downstream 6537 544434 ~ 574624 (+)
G6929 NA non-coding downstream 6725 544622 ~ 576356 (+)
G6939 NA non-coding downstream 60664 598561 ~ 599050 (+)
LOC111194143 NA non-coding downstream 497175 1035072 ~ 1035957 (+)
G7057 NA non-coding downstream 499380 1037277 ~ 1037489 (+)
G6901 LOC108436678 other upstream 100427 413131 ~ 437388 (+)
G6995 NA other downstream 162867 700764 ~ 702320 (+)
G7109 NA other downstream 802309 1340206 ~ 1345431 (+)
LOC103037883 LOC105898698,LOC103360086,LOC101074561,LOC107391594,LOC102794576,LOC103154361,LOC100701095,LOC105938735,LOC105901802 other downstream 1501490 2039387 ~ 2047563 (+)
carm1 carm1 other downstream 1512386 2050283 ~ 2080541 (+)
G7296 sept9,LOC108411966 other downstream 1992719 2530616 ~ 2558344 (+)

Expression


Co-expression Network