CI01000009_11255397_11267304


Basic Information

Item Value
gene id CI01000009_11255397_11267304
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 11255397 ~ 11267304 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_11255397_11267304.mRNA
GTCTGCAGGTGTAGGTGAAGATGGTGCTCTAGTGGATAAATTTAAGCAGTTCACTGAATATCAGCTGGCCAAATACAATACACAGAAACATCGCTGCAAACACAACAAGCAACAAAAGAAAGGAGAGAAAATCTCTGCTGCGCAGTGGAAAAAGTGGGCTGACCACCTCAGAGTGGACGACTCAATTCTCCAAATATATTTGGAGAGCCAGAATCGTGATACAAAGGATAAAAAACAGTCTGAATTCAACCTCAAGAAGATGATAAAGCGTCTTCACATCAAAGAATCTGCAGAACATGTCATGGCCATTCTGGGAAAGAAATACCCGAGTGATCCGAAGGCCTTCTCTCGCAGTGGTCTTAGTGGGGTCTGGGAGAGCGAGAGAGCTGGAAAACGGATGAAACTTAAGCAACCCGACACATGGGAGTGCAGACTAAGTCAGGAAGGAAACAAAGCTGCCACTTGGGAGAAGCTCATCGATGGGAAGTCTCTTCCTTTCATGGCAGTGCTGAGGAACCTGAGGAACATGATTTCTGTGGGCATCACTGGTGGGCCTGCCGTCGAGGTGCCAAGCTCCAAGGAGATTCTGCGAGACATTCTGAAGAAATTGCCAAAGACCAAACGATTCCAACGACACAATTGGGACACAACAGTGCGCAAGAGACTGAGAGTTACAATGCGAGTGCCCTTCATATACCGCAAATTCAACATTAAACGCAATCTCCTGAGAAAAGCAAATCAGAGACTGTACACTCAGGAGCTTCTGAAGAAGTACTGCTGTGCTTTGGAGAAAGCTGTGCAGATCTCCTGCAAGTACAACATCCCCCCTCTCCCTGGACGCACTCTTGTGATCTGTAATGCTACTTTTTCAGAGGATCGCAACTGGAGTGGCGCTGAGGATGTCTGCTTGCCACCTGAAAGCACTGATGACATTGACAATAGTAAACTCCCAGCTTCGGTACAGGAAAGTGCACTGCTTTTATGCATGATGATTAGCTACTGCAGTGAAGATTCCCAAGTCGTACTGCATAGAAAGCATGACTTCCAGGAGTTCAAGTTCAAGTCTGACGTCCTTCTGGATAAAGTGAGACAAGCAATGAAGCAAGTGAATGATATAAAAGACTGCGACAGAGAATCTGAATTCATAATGTTCTCTACATTGTTTACTAGGATGACTGAAGAGAAGATAAAGCTGGATCGTATAGTTGTGATTGAAAATTGCTACACCAACAGGGATTTGATGGTGGATATCGATAACTATCGGCAAGATACCTACCCTGATGCTGTTGTGATAGAGGTGCTGCTCGGAAAAAGGTGTCCATATATTGAAATGAAATACAGGCTGGAATCCAACACTGTACAACTCTGGGGGTTTAGTGAGCAGATCCTGAAGTTTGTCTCTGAGAGAGGCTCCTCAAGGATGCTGCAGCACGTGGAGCACATGGACAGAGTCTATAACATCCCTCCACCACAGGGGCACAAAACTGAACCAGAGAGAGCTGCAGATGCCATCCCACTGCTAGCAACACCAAAGTTCAGATGGAAAGGTGTGCGAGTGTTCATCTCTTCTACGTTCAGGGACATGCATGCGGAGAGGGATGTCCTTGTGCGTAGTGTGTTTCCAGAGCTCAGAAGGCGGGCAGCGGCACACTATCTCTACCTGCATGAAGTGGAGCTGCGCTGGGGCGTTACGGAGGAGGAGTCTAACCGTGCTGTGGAGCTCTGTCTATCGGAGTTGAACTCTGCGCCTGATGGGTTATCCATTACTGAAATGGAGATTCGACAGTTTCAAGCGCTGTATCCAGACTCTGCCCAAAGTCGCATGTTCTTCTACTTCAGATCGCCCCATCTCACCAGTTATCCCTGTGAATGGGGTGGGGTGGTGGATGGAAAGCCCTATGTGAAAGGGCTGGAGGACTTCGGGAGGGCAGCGCTGGAGGATATCTGGGAAGTCGTACAGCAGCTGTTTGTGGAGGAGACAGATGAAAATTTGACCTCAGAGATTAAAGAACAGGAAGTCCATCAGGATTCCCAACAGCGGCAGTGTCACGGCAGGGCAAAGCTTATTTCTATGGCAACAGAAAAAGTTCAAGAATGTCAGCAAAAAGAAGGAATTCTAATGGTTGAGGGAAAGCCTGGAGAGGGCAAAACTGTGTTCATGGCTGCTCTGGCCCAGGCACTCAAAACCTCTGTCAAAAACAAGAAAGCCCCTCTTTGTGATGTCATATCCTACTCCACAGATGCTAGCCAGTCAGCTTGCAGTGTTGAGCAGCTTCTTCGCTGTCTTGTTCAGTGGCTGAGGAAAAGAAAAGATGATGTGGAGTTGCCTCCAAACACATCTTATAAAGACTTGTTGTCTGAGTTCCACTTGAACTTGAAGGACCTGAACAAAGAGAAGCCACTGGCCTTGCTTGTTGATGGGGCGGACCGTATCCATGACGGTCGAGGTCAGAGGGTGTCAGAATGGATACCACAGCACATCCCTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_11255397_11267304.mRNA True 2488 mRNA 0.48 19 11255397 11267304

Neighbor

gene id symbol gene type direction distance location
CI01000009_11237437_11237793 NA coding downstream 17604 11236603 ~ 11237793 (-)
CI01000009_11129491_11164618 NA coding downstream 90570 11129369 ~ 11164827 (-)
CI01000009_11116286_11120640 NA coding downstream 134749 11116286 ~ 11120648 (-)
CI01000009_11102518_11109578 NA coding downstream 145819 11102121 ~ 11109578 (-)
CI01000009_11071390_11075169 NA coding downstream 180212 11067012 ~ 11075433 (-)
CI01000009_11491188_11491908 NA coding upstream 223631 11490935 ~ 11492001 (-)
CI01000009_11538058_11566095 NA coding upstream 270754 11538058 ~ 11566095 (-)
CI01000009_11573561_11616345 ABCA12 coding upstream 306144 11573448 ~ 11616345 (-)
CI01000009_11660386_11668299 POFUT2 coding upstream 392346 11659650 ~ 11668299 (-)
CI01000009_11707091_11707360 NA coding upstream 437708 11702572 ~ 11707589 (-)
G57439 NA non-coding downstream 507616 10747514 ~ 10747781 (-)
G57436 NA non-coding downstream 516943 10738072 ~ 10738454 (-)
G57435 NA non-coding downstream 518072 10736863 ~ 10737325 (-)
G57426 NA non-coding downstream 533308 10721703 ~ 10722089 (-)
G57527 NA non-coding upstream 27332 11294636 ~ 11294872 (-)
G57533 NA non-coding upstream 48104 11315408 ~ 11315645 (-)
G57550 NA non-coding upstream 94975 11362279 ~ 11362547 (-)
G57565 NA non-coding upstream 119041 11386345 ~ 11386611 (-)
G57568 NA non-coding upstream 129599 11396903 ~ 11397293 (-)
CI01000009_08858198_08860555 NA other downstream 2394834 8856310 ~ 8860563 (-)
G55814 NA other downstream 2827385 8425821 ~ 8428012 (-)
G53515 NA other downstream 5750149 5502395 ~ 5505248 (-)
G52828 NA other downstream 7023928 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 7993440 3261038 ~ 3262843 (-)
G59097 NA other upstream 1020913 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 2708084 13975099 ~ 13978614 (-)
G59490 NA other upstream 2766260 14033564 ~ 14037873 (-)
G59811 NA other upstream 3595093 14862397 ~ 14887464 (-)
G59941 NA other upstream 3864800 15132104 ~ 15132503 (-)

Expression


Co-expression Network