CI01000009_11434018_11455253


Basic Information

Item Value
gene id CI01000009_11434018_11455253
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 11433792 ~ 11455635 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_11434018_11455253.mRNA
CTATTTATATCAGTATTTTATGTTGTATGGAGCAGTCAGTTACTCTTAATTGGACTTGCACAGTACGTTTCTTTCACAACAATAAACTAGCTAATTATCGGAAGCTTACGAGCACAAAAGGTCACAACGTAGAGTAGTGCAATTACCTCTAACGTTCTTAACGTAACTCCGCACACTCATATGGTCCCTTTGATGTGGTACAGTAAAAAATCTCATTATAGTAGCCATGGGCAAGTTAAATTGGTCACGACTTGAGGAATATCTACTAAGACAGGTGCACAGCAACGTTCTGCCAACTAGCATTGTTCCCTCCGCTGCTGCTGGCACGATACGGCATTTGTCTGCGGTTTGCTTTCAAACAAATTCAAATGGAAGCAATGTGAAGCCATCATGCCTTAGCCACCGGAAGCCAAAACCAGCTAGAGTTTCAATAAGATATCTCATGAGAATCATCTGTCTCAAAGTCTGGCAGGAGCTGGGCCACCACCCACCATATCCATCACAGCCTTTGCCAACCTGGCATCTCCCCACAGTCATCCCTTTTCCAAAGTGCCACGTCATGTCTTTTCTGAAGGACAACAGAACTTACTTTAGCGTGACTGATAATGAAAATGCAGGTAACGACCCATTTTCGAGGCGGCAAATGACAATGACAGCAGCCACTGAATGTTTGGATCAAATGGCCAGGGGTGCGATTGCTCTGAAAGCCAGACCCGGAGCCATTTGCGCCTCTGGCTTCTCCAGAGCTCAGAAGAATAGAGGGGACAGTGGGCTGATTGACAGAGGAAAGGCGTATTTACCAACAGCCCCCACAGATGAGGGCTTGACTGGATTCACATGCGGCCTTGACCGGGAGATGATCCTGATCTTAAAACTCTATCAACAGCTCATTGAGATTCAGGAGAGGTTTTTAGAGAATGCGCCTCATAAAATAAGAAACATCCAGATAAAAACAGCACGGTGAGGATCAAGGTCATACAATATCTCTCCAGCTGAGTTTCATCTATGTGCAACTTTGACTAAGCACAAAACTCTGATAAAAGACACCATCATTCATAGTAAATGTCTTCTCACAGGAAGATTGCGGGATCTCTATGTCTCAATGTGGCCATATGGGTAATGTATTAAAAGAATAGTTCACCCTAAAATAAAAATTCATCATTTACTCACCCTCATGTTGTTCCAAACCCAAATGACTTTCTTTCTTCACTGACACAATTTTGAAGACTGAGCTGATCGCTCTTTTCCACACAGTTAATGCCCTAATGAATGGGGATTGGGGCTTTCAAGCTGAAAAAAAAAGTTTTACATATGATTCATGCAATATATTTCAAGACTAGTCTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_11434018_11455253.mRNA True 1346 mRNA 0.43 5 11433792 11455635

Neighbor

gene id symbol gene type direction distance location
CI01000009_11342784_11347580 NA coding upstream 84965 11342784 ~ 11348827 (+)
CI01000009_10644080_10691030 CPS1 coding upstream 741742 10644080 ~ 10692050 (+)
CI01000009_10583435_10617169 MAP2 coding upstream 816623 10583435 ~ 10617169 (+)
CI01000009_10555555_10560050 NA coding upstream 873394 10554350 ~ 10560398 (+)
CI01000009_10491868_10508777 NA coding upstream 924783 10491401 ~ 10509009 (+)
CI01000009_11493236_11526914 VWC2L coding downstream 37601 11493236 ~ 11526914 (+)
CI01000009_11669960_11702667 HIBCH coding downstream 214325 11669960 ~ 11703539 (+)
CI01000009_11711277_11714191 MSTN, GDF-8, MSTNB coding downstream 255525 11711160 ~ 11714694 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 coding downstream 305971 11761606 ~ 11766944 (+)
CI01000009_11769442_11773619 OSGEPL1 coding downstream 313807 11769442 ~ 11773619 (+)
G57589 NA non-coding upstream 2155 11431344 ~ 11431637 (+)
G57567 NA non-coding upstream 36453 11397003 ~ 11397339 (+)
G57564 NA non-coding upstream 47209 11386354 ~ 11386583 (+)
G57557 NA non-coding upstream 62024 11371395 ~ 11371768 (+)
G57556 NA non-coding upstream 63320 11369988 ~ 11370472 (+)
G57615 NA non-coding downstream 8290 11463925 ~ 11464220 (+)
G57616 NA non-coding downstream 9014 11464649 ~ 11464858 (+)
G57618 NA non-coding downstream 11630 11467265 ~ 11467524 (+)
G57626 NA non-coding downstream 57267 11512902 ~ 11513204 (+)
G57606 NA non-coding downstream 75162 11530797 ~ 11532780 (+)
CI01000009_09853929_09854476 SAP18 other upstream 1577205 9853929 ~ 9856587 (+)
G56100 NA other upstream 2303506 9129300 ~ 9130286 (+)
G53651 NA other upstream 5185400 6245564 ~ 6248392 (+)
CI01000009_05931829_05943829 KCNH3 other upstream 5500991 5931718 ~ 5943899 (+)
G53388 NA other upstream 5894738 5522242 ~ 5540638 (+)
G57811 NA other downstream 478307 11933942 ~ 11935251 (+)
CI01000009_12432736_12435509 NA other downstream 976923 12432538 ~ 12436017 (+)
G57682 NA other downstream 1369834 12825469 ~ 12892339 (+)
G57691 NA other downstream 1450809 12906444 ~ 12918465 (+)

Expression


Co-expression Network