CI01000009_11491188_11491908


Basic Information

Item Value
gene id CI01000009_11491188_11491908
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 11490935 ~ 11492001 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_11491188_11491908.mRNA
AGAAGCTGCCAGAGGAAAGCACTTCAAAGAAAGAGTTTCCTTTTTACACTGAAAGATAGACTAGTATTGACAATATGTCTAGTCTATAATAAAATGACTGCCTCTGGCATGCTGAATGCATCTGTGCAGAGACTGTTTGCCTTGCATGTGGAGAAAAATGCATTTGAAGTGGAACAGTATAACGCCATTTGGTCTTCGGCAGCTCCGCCGAGAAAACAATTTGATGTCAAGTTAATAAACGAGAATAGATTCGATAGCATTACGTTTCCTCAGTGCGAAAGTAAGTTTATCTACATTGGAGATGCTCGCGCCGCCAGAGCAGACAGAAAAGCATCGTCTGAGACAGCGCTACGAAGTTGAGTGCGGAGAGGAATGAGAACAGAGGAGCGTTTCATCTTCAATAGGTCGCCTCAGTGAGTTCAGCTCCGCGGACAGCGCCGGATCCAGAGTTCAGCACCGCGGACAGCGCGCGATTCTGCACTGCTCGTGTTCCAATCTTCTCCTCGCTTCTCTAATCATGAAGCATGGTTTTGTGAAACGTGCAACAGGACAGTCTCTCTGGACCTTTGGACATTTTTTGCTACTCTTCTCAGCGTTTTTATTCGTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_11491188_11491908.mRNA True 613 mRNA 0.45 2 11490935 11492001

Neighbor

gene id symbol gene type direction distance location
CI01000009_11255397_11267304 NA coding downstream 223631 11255397 ~ 11267304 (-)
CI01000009_11237437_11237793 NA coding downstream 253142 11236603 ~ 11237793 (-)
CI01000009_11129491_11164618 NA coding downstream 326108 11129369 ~ 11164827 (-)
CI01000009_11116286_11120640 NA coding downstream 370287 11116286 ~ 11120648 (-)
CI01000009_11102518_11109578 NA coding downstream 381357 11102121 ~ 11109578 (-)
CI01000009_11538058_11566095 NA coding upstream 46057 11538058 ~ 11566095 (-)
CI01000009_11573561_11616345 ABCA12 coding upstream 81447 11573448 ~ 11616345 (-)
CI01000009_11660386_11668299 POFUT2 coding upstream 167649 11659650 ~ 11668299 (-)
CI01000009_11707091_11707360 NA coding upstream 213011 11702572 ~ 11707589 (-)
CI01000009_11715928_11716422 NA coding upstream 223247 11715248 ~ 11716422 (-)
G58857 NA non-coding downstream 23362 11467367 ~ 11467573 (-)
G58854 NA non-coding downstream 26548 11464061 ~ 11464387 (-)
G57581 NA non-coding downstream 67283 11423400 ~ 11423652 (-)
G57580 NA non-coding downstream 67817 11422706 ~ 11423118 (-)
G57568 NA non-coding downstream 93642 11396903 ~ 11397293 (-)
G58923 NA non-coding upstream 19800 11511801 ~ 11512029 (-)
G58924 NA non-coding upstream 20208 11512209 ~ 11512681 (-)
G58925 NA non-coding upstream 21630 11513631 ~ 11514135 (-)
G58926 NA non-coding upstream 22765 11514766 ~ 11515081 (-)
G58927 NA non-coding upstream 23511 11515512 ~ 11515838 (-)
CI01000009_08858198_08860555 NA other downstream 2630372 8856310 ~ 8860563 (-)
G55814 NA other downstream 3062923 8425821 ~ 8428012 (-)
G53515 NA other downstream 5985687 5502395 ~ 5505248 (-)
G52828 NA other downstream 7259466 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 8228978 3261038 ~ 3262843 (-)
G59097 NA other upstream 796216 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 2483387 13975099 ~ 13978614 (-)
G59490 NA other upstream 2541563 14033564 ~ 14037873 (-)
G59811 NA other upstream 3370396 14862397 ~ 14887464 (-)
G59941 NA other upstream 3640103 15132104 ~ 15132503 (-)

Expression


Co-expression Network