CI01000009_11707091_11707360


Basic Information

Item Value
gene id CI01000009_11707091_11707360
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 11702572 ~ 11707589 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_11707091_11707360.mRNA
ACTTAAAAAATGCGTCTTCTTCACACAGGGCAAGTGTGAGAATGCTATACATCATGGCTGACCATCTGGAGTGTCTCAACTACACTTTGTACAGAAATACCTACATTCTAGCTTCTTACCCATACAAAACCCTATAAACTGTCAACCAAGGGAATAAAACCTCTGTATCAGGCCATCTTTGCATCTCTTCGCCTCACTGCTTTCAAACCAATGCTACATTATTTATATCATGGGATGCATGAAATCCAAGCACCGCGACCCTACTCAGAATGCCAGCTCATCGGAGAAAGTGGATGGCAAGTCAGGAAAGCAAGGAGATAAAGCCGTTCTAGTTTTCTCAGAGATCGGCTCCATGGAGGACTCAGTGCAGGTCAATCCAGTACTGCTGGACTATGCCCAAAGACTCTCAGAGGAAATTGTGGCCCGGGCAGTACAACAATGGGCAGAGGTGGACAGCCGGTACAGTGACATCCCCTACATTGAGTGTGACGTGCCATAAGTTTTTAACTGTGTGGAATAAGATTGGATTGGTCTGGCTCACTCCTCTCCTGTATGTACTGTAAAAGAGAGCTTTCAGATCAACAAATGAAGGCCAGTGGAGAATCATGTCATTTCGGGAAGAGGTTTTCTTAAGAAATGGCCATGGAGCTGTTATAATACAAGACTGCATCTTTTTATGTCTCTTGTTTACCCTCAAAGCCCAGTTGTTTAATTGGAGAGTCCCTGAAATTGTCCAAAGGCCACAATCTTTCCAACCATGTTAATTATAGACTTCATCTTTTTGCCTTTAGTATTTCATGTTTATGTGGCTCAGCACATCAGACAGTACCTCATTTCTATTTTCCATCCATCCATCCATCGGTCTTAAGGTGTGGTCACATTGGCTTTCTGTGAAAAAGGTTCATTGTCTGTTACCACTTCAATCCAAGTCACTTTCAAACCAAGCAGCTTTCTGTTGGTCAACGTAGTGAATCTGAGTGACCAACTGTACCTGTAGCGAAATCTACATGGGCAAACCTTTCGCCCTCAGATTAAATTCTCAATCACCTATTTAAATGACTGGATTTTCGCCATGGATTTTGCTGAACAACAGTAAATGTTACCACACATTTACAGAGCATCCGCTCAGGGGTCACGGTTTCTCTTTAAGGGGCCAGTGCTGGCTTTTAGGGATCAATAGGTGTACATTACTTCACCGGTAACCTTTTTTTGACATGACAGCTGTGTCAACTGTAATTCCTGGTACAAAATCAACGACCTTGTGGTCACTATGGCCAGACATTGTTTATCAATGACACATTCTTAGATTTAGAGCTGTTTAAAGATCATCCTGTATCCTCATGATGATGGCATGAGAGAATACATTCGAGCAGAAGGATTATATCCATCCATCCCAAAATTTGTGTATCAAGCCATTATATAATTTTGTTAATTTAAGTTTTTTTCTGTGCAGATCAAATATGCAATTCTTAAAGGCTAAGAAGATTTAAAAAGAAACTGAAAATTACATATTGCTACCAAGACTGCCAAACCCCTCACTAAGAGAAAGAAAAAATTCAGACTGGGGACCAAACACGCCAATGTCCTTAATGATCGTTAATACAAGCACAATTACTCTTCTGGTAGTGTTTTAACAGCTGCTCACCAATGCTTTTTATTGATGGATATATTGGCACTTCTGGATCTTGTGCCATGCTGTCAGGTAGCCAGAATCCCTTTAATGATTTCCAGATCAATAGAGTGCAACAGTTGGGTTCTGGAAGTAAAAATCACATTATTTTTCTCCATAGAGATCGATTTTTAATGATAAATGTATAAAGCTTTTAAAATCTACCTGAGCTCTGAGGTGGTTAACTGATGATATATGCTTCTTCACAAGTCAGTGTGTTTTCAACTACATAAAAAAAAACTTAAATTCAGAGGGAAGGATCTACTTATAATCATAAGGTTACCATGAAAATCTGTTCTGAAGGAACTCGCCAGTGACCACCCTCTCCCATAAAGCATTTTGAATCCTGTAATCAAATAAATATCACAAAAAACTTATATTTTTGTATATGTCAGAAAATGTTGTGATTAACCTAAAATTTTAGGTTCACAGTTTTGTACCTTTGTCTTGTTTTTCAGATTACTTTTTTTTTTTTTGCTTCAAATAAAAGGTTGTTGGAGCTGGCTGTTTGGTTCATGGCTTTAAACTCTTTACTGAGGACCATTTTCAAATCCCTATGGAGAAAATGAACGAGAAAATTACTTCCAGAACCGAGGCCACTGAAAAAGTGGGTAGTCACTGTTACGGCCTGTTGCAAGGAGCAAGGACTGCACTTTGACCATTATACTTTTGCATAGAAAGTCATAAATGCAGAGTGAAATCATAAGATATAAAAGAAGGACTTAAAGTTGTATTTTACGAGGCCTTTCAGCACATTACTTAATGTGCTCAGAGTAGAACTTCAGTATATCTCAGTATCTCAAAGAACAATCAGTACATGATTCATGGTGTTCATTACTCTCCTTATCTTCCTTAATTATAATAGGCCAATAGAACTAGGTCATATTTGGTTTAGGATGAACTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_11707091_11707360.mRNA False 2578 mRNA 0.39 1 11705012 11707589

Neighbor

gene id symbol gene type direction distance location
CI01000009_11660386_11668299 POFUT2 coding downstream 36713 11659650 ~ 11668299 (-)
CI01000009_11573561_11616345 ABCA12 coding downstream 88667 11573448 ~ 11616345 (-)
CI01000009_11538058_11566095 NA coding downstream 138917 11538058 ~ 11566095 (-)
CI01000009_11491188_11491908 NA coding downstream 213011 11490935 ~ 11492001 (-)
CI01000009_11255397_11267304 NA coding downstream 437708 11255397 ~ 11267304 (-)
CI01000009_11715928_11716422 NA coding upstream 7659 11715248 ~ 11716422 (-)
CI01000009_11728865_11759677 PMS1 coding upstream 21170 11728759 ~ 11759677 (-)
CI01000009_11767607_11768611 NA coding upstream 59897 11767486 ~ 11768611 (-)
CI01000009_11774462_11788963 ANKAR coding upstream 66730 11774319 ~ 11788963 (-)
CI01000009_11792162_11799153 ASNSD1 coding upstream 84561 11792150 ~ 11799359 (-)
G58931 NA non-coding downstream 184394 11520311 ~ 11520618 (-)
G58930 NA non-coding downstream 187117 11517437 ~ 11517895 (-)
G58927 NA non-coding downstream 189174 11515512 ~ 11515838 (-)
G58926 NA non-coding downstream 189931 11514766 ~ 11515081 (-)
G58925 NA non-coding downstream 190877 11513631 ~ 11514135 (-)
G58885 NA non-coding upstream 95949 11803538 ~ 11810843 (-)
G58996 NA non-coding upstream 228748 11936337 ~ 11936637 (-)
G59011 NA non-coding upstream 285472 11993061 ~ 11993339 (-)
G59014 NA non-coding upstream 343389 12050978 ~ 12073540 (-)
CI01000009_08858198_08860555 NA other downstream 2844449 8856310 ~ 8860563 (-)
G55814 NA other downstream 3277000 8425821 ~ 8428012 (-)
G53515 NA other downstream 6199764 5502395 ~ 5505248 (-)
G52828 NA other downstream 7473543 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 8443055 3261038 ~ 3262843 (-)
G59097 NA other upstream 580628 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 2267799 13975099 ~ 13978614 (-)
G59490 NA other upstream 2325975 14033564 ~ 14037873 (-)
G59811 NA other upstream 3154808 14862397 ~ 14887464 (-)
G59941 NA other upstream 3424515 15132104 ~ 15132503 (-)

Expression


Co-expression Network