G203745


Basic Information

Item Value
gene id G203745
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 6255462 ~ 6275292 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU276464
aataaaataataaaataaattacagtttttcccaaatgtttacacaaaaaatgtggaactatgcacacaaatccaaaaacatgaagctcatgtgtcaacattgtgactccaaactgctaaactctaaacacaattttatatgttctcactcaaatatcattctaaatcacagctttgcaaatcgcTAAACACAAATTTCATCATTTAGAAAACCTTGCTCACCTGAGAATCACTGGCCTCCAAATACAAAACCCTTATTACCAAATAGTCTCACACAAGTTGCAGCTATATAAACTTAATTAGCAGAACGTTTCAATCACTTGTCAGAATATAAAAGAGGCCTCAAGTGACTGATACAGCCCTACTATGTTGTCATCTGGGATAATGTAAGTTTCCACTGGGCAGCTCTGGTCAATGATTGGTTCTCTAAATCCACAGTTTGTTTTGCTGCACCTTCCACCATATTCCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU276464 True 471 lncRNA 0.35 2 6255462 6275292

Neighbor

gene id symbol gene type direction distance location
LOC103038710 ssrp1a,LOC108269282,LOC108424210,LOC107737799,LOC107684835 coding downstream 12004 6226632 ~ 6243458 (-)
LOC107196999 NA coding downstream 33462 6210816 ~ 6222000 (-)
rad9a rad9a coding downstream 59280 6188673 ~ 6196182 (-)
LOC111195707 LOC108424215,LOC105906002 coding downstream 83961 6166055 ~ 6171501 (-)
ran ran,LOC107588340 coding downstream 90163 6161058 ~ 6165299 (-)
LOC103033238 med19,med19a,LOC107745077,LOC107684830 coding upstream 69303 6344595 ~ 6360716 (-)
LOC103038082 LOC108424155 coding upstream 86096 6361388 ~ 6367187 (-)
clp1 clp1,LOC107750374,LOC107680590,LOC107749782,LOC107594950 coding upstream 117903 6393195 ~ 6401305 (-)
mif mif,LOC107680670,LOC107594949,LOC107594906 coding upstream 132187 6407479 ~ 6409639 (-)
LOC103037435 NA coding upstream 157093 6432385 ~ 6435973 (-)
G203740 NA non-coding downstream 44881 6209914 ~ 6210581 (-)
G203738 NA non-coding downstream 49606 6205157 ~ 6205856 (-)
G203737 NA non-coding downstream 52403 6202003 ~ 6203059 (-)
G203728 NA non-coding downstream 136513 6118648 ~ 6118949 (-)
G203725 NA non-coding downstream 166317 6087255 ~ 6089145 (-)
G203761 NA non-coding upstream 141976 6417268 ~ 6420967 (-)
G203762 NA non-coding upstream 146658 6421950 ~ 6486904 (-)
G203763 NA non-coding upstream 147489 6422781 ~ 6424265 (-)
G203783 NA non-coding upstream 238659 6513951 ~ 6553987 (-)
G203818 NA non-coding upstream 306030 6581322 ~ 6581736 (-)
G203734 NA other downstream 64347 6185773 ~ 6191115 (-)
stx3 stx3,LOC106516362,LOC103147491 other downstream 96953 6121487 ~ 6158509 (-)
ids ids other downstream 872694 5368819 ~ 5382768 (-)
G203065 NA other downstream 3773148 2481727 ~ 2482314 (-)
setd7 setd7,LOC107680671,LOC107676520 other downstream 4135338 2105158 ~ 2120124 (-)
LOC103032694 zdhhc5,zdhhc5b,LOC107594917,LOC107750372 other upstream 101443 6376735 ~ 6392766 (-)
selenoh selenoh other upstream 126864 6402156 ~ 6405288 (-)
trnai-uau_40 NA other upstream 254747 6530039 ~ 6530131 (-)
trnai-uau_41 NA other upstream 255295 6530587 ~ 6530679 (-)
trnai-uau_42 NA other upstream 256284 6531576 ~ 6531668 (-)

Expression


Co-expression Network