G203761


Basic Information

Item Value
gene id G203761
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 6417268 ~ 6420967 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU276490
CATCACTGACTGTGCCTTATCACAGGGCACATTACATAAACAGGCAAATATGTTTTTATCTGAAGCTATTGAGCATAGGCACTTGTTCTGAGGAGGTTTGTGgcttttttattgttcttattAGTATCAGAATTATATCCTACTGACTGGAAttagaaaacattttgtccataTCATCCAGCCCTAAATACAATCATGATGTGATCAGATGTAAACAGGGTCTATGTAACAACACAAGTAGACACATTTAGGATTTACATTGGAAATGCTTGGgtCacaatttagtttaaaatctgaatgaaaaaagaaacagaatcaCAATCCGTGCAATTGTACTTGTTTGAAAATTTGCATGATCTTTTGAGAAACACTGTCTAATGAACTGCTGTACATGGATAAACACTTAACCGAGAGGCATGTGTGTATGGGTTCTACAGTACAATGATATGATGATTTAATGGAAGCACTGATGAGGTCCTGGTTCTGTACTCATCGTGTTATTGATAGTATTATGATTTacttgaaaaaaatgttttaggacATCTGTGTTTAAAGATCGGACAGACCAGGCTGTTGTCAGGACATGTCTGGTTAATTTTACCAGAAGGATGGAAAGTAGAAAGTGCATGCAAGTACACTATATGACCAaagtccaaatgtttgtggactgTTTAGTGAGTGTATTCAATGCTGacacaaatgtacaaatgcacacacacagcttgtctagtccctgtagagaagtattactgccaatagaataggactctctataGCAGATAAACGTTAAACCCATGTATTGGCACCATACCTAATGCCAGGCGAGGCCCAGGAGATGAGTGGAACTGGAACTGGAATAATGGTGCCCCACCAAGAACTTCCAGACATGctgaatataaaaaacactctaaGCAATGATgtgaactataataaaaaaaaaacttaacagcagcaggataaactcctcaaaagaaacaataaatgagcatgtgtcccaatacttgtgTCCATATAGTGTTTGTGTGCAAAGTATGTAAGCAAGTTCTCAGTTCACGCTagaggaaaaaacataaaaataaactacaaaACAACAAATGGCAAAGATCGGCTTAAGACTGCTTTATGGAACACAATGAATAAGAGATGATGTACTGAGCTTATGGAAGATGATGTCTATTGGCAAATCAGATACTGTTCTTCATCTATTCATGTAAGATGGTTGAAATCAGATGTTTTACAAAGCATTTAAAATCTCTTAAACTCTAAGAATTCATCAACAAGTCCAAACGTCCATTCTTCATTTGTAACATGACAGTATTTAGACAATTATGAGCAGCCAAGGTCTAAAATAAGTCTAAATCTAGATCACAAGAATTTGCAGAGGTGAATCAAAAgggtccaagactaggctttcAAACATTTCTGGGAAACAATACATTAGCATACAGTACTTGTCAAATGTGtcgacacaccttctcatttcaATGTTAATTCTTTCTTTCAGACTATCAAGAAACATACAAGGAACCATGTaacttaaacatgttaaaaaaaaaaaaatactctgctGTTatcttgcagtttctgaggttggtaactttatcctgtacaacagggGTAACTCTTGATCTTTCTTTCCTGGAGCAATCCAGAtaagagccagttccatcacaACGTGTTTGATGATCTTTGAGTCTGCACTTGAGGattctttcaaagttcttgaaatgtgtCGGACTGAccgaccttcatttcttaaagctatttttattatttacttagttgagtggTTCTTGCCAtagtatggattagaacattactcaaatagaatTGTTTACTCTATACTAActgtacctcttcacaacacaactgatcgCTCTCcaacacattaagagggcaagaaatCAAGTAAATTCCTGGACAGGACACGGCTGTTAACTGTAAGctgagatgtgcaaagctgtcatctaggTAAGATATGTCTActgtgaagaatctaaaatataaaacacattatataattccatatgttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU276490 True 2033 lncRNA 0.36 3 6417268 6420967

Neighbor

gene id symbol gene type direction distance location
mif mif,LOC107680670,LOC107594949,LOC107594906 coding downstream 7629 6407479 ~ 6409639 (-)
clp1 clp1,LOC107750374,LOC107680590,LOC107749782,LOC107594950 coding downstream 15963 6393195 ~ 6401305 (-)
LOC103038082 LOC108424155 coding downstream 50081 6361388 ~ 6367187 (-)
LOC103033238 med19,med19a,LOC107745077,LOC107684830 coding downstream 56552 6344595 ~ 6360716 (-)
LOC103038710 ssrp1a,LOC108269282,LOC108424210,LOC107737799,LOC107684835 coding downstream 173810 6226632 ~ 6243458 (-)
LOC103037435 NA coding upstream 11418 6432385 ~ 6435973 (-)
LOC111188205 LOC108424126 coding upstream 14563 6435530 ~ 6444450 (-)
LOC111195822 NA coding upstream 23239 6444206 ~ 6457539 (-)
LOC111195712 NA coding upstream 583081 7004048 ~ 7013680 (-)
LOC103028028 NA coding upstream 1809124 8230091 ~ 8246950 (-)
LOC111195709 NA non-coding downstream 128336 6269259 ~ 6288932 (-)
G203745 NA non-coding downstream 141976 6255462 ~ 6275292 (-)
G203740 NA non-coding downstream 206687 6209914 ~ 6210581 (-)
G203738 NA non-coding downstream 211412 6205157 ~ 6205856 (-)
G203737 NA non-coding downstream 214209 6202003 ~ 6203059 (-)
G203762 NA non-coding upstream 983 6421950 ~ 6486904 (-)
G203763 NA non-coding upstream 1814 6422781 ~ 6424265 (-)
G203783 NA non-coding upstream 92984 6513951 ~ 6553987 (-)
G203818 NA non-coding upstream 160355 6581322 ~ 6581736 (-)
G203819 NA non-coding upstream 165484 6586451 ~ 6587438 (-)
selenoh selenoh other downstream 11980 6402156 ~ 6405288 (-)
LOC103032694 zdhhc5,zdhhc5b,LOC107594917,LOC107750372 other downstream 24502 6376735 ~ 6392766 (-)
G203734 NA other downstream 226153 6185773 ~ 6191115 (-)
stx3 stx3,LOC106516362,LOC103147491 other downstream 258759 6121487 ~ 6158509 (-)
ids ids other downstream 1034500 5368819 ~ 5382768 (-)
trnai-uau_40 NA other upstream 109072 6530039 ~ 6530131 (-)
trnai-uau_41 NA other upstream 109620 6530587 ~ 6530679 (-)
trnai-uau_42 NA other upstream 110609 6531576 ~ 6531668 (-)
trnai-uau_43 NA other upstream 111470 6532437 ~ 6532529 (-)
jph3 jph3,LOC100148063,LOC107714052,LOC107654149,LOC107581833 other upstream 173411 6594378 ~ 6673928 (-)

Expression


Co-expression Network