CI01000009_11892226_11892558


Basic Information

Item Value
gene id CI01000009_11892226_11892558
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 11892226 ~ 11892677 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_11892226_11892558.mRNA
TCCAAACGACATGAGGGTACACAAATCACCCTTACCGGCCACTGTACAGTACTTTCTGCAAAAAGTTTCAGAGAACATTCATGTGCTTGTGACACCATCAAGTTAAAGGCCTCACTGACAGACTCTATGTGTGCAGCCAATTCTAAACTTCCACCAAAACACACTTGCTGGTCTATGAGAGAATACAGAGCCTATAAATCACACTGCACCAAACGTCCACCAAGCTGCTTTGCTTTAGGCGTTAGCACAGATAGATAAAACAGAAGCCAAGGCATAAGACTGTATCCTCAATCATAGTCATTCATATTCACAACGAAAGATACAGTGACTCTGGTGATGAATCATTCACATGTGACCAGAATGATATTCATTTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_11892226_11892558.mRNA True 377 mRNA 0.41 2 11892226 11892677

Neighbor

gene id symbol gene type direction distance location
CI01000009_11875722_11882183 STAT1B, STAT1 coding upstream 9305 11875486 ~ 11882921 (+)
CI01000009_11835682_11873220 STAT4 coding upstream 18896 11835682 ~ 11873330 (+)
CI01000009_11803818_11808988 SLC40A1 coding upstream 82991 11802384 ~ 11809235 (+)
CI01000009_11789703_11791511 NA coding upstream 100490 11789703 ~ 11791736 (+)
CI01000009_11769442_11773619 OSGEPL1 coding upstream 118607 11769442 ~ 11773619 (+)
CI01000009_11993879_12004644 NEMP2 coding downstream 100967 11993644 ~ 12004765 (+)
CI01000009_12022660_12022944 NA coding downstream 129883 12022560 ~ 12023388 (+)
CI01000009_12028975_12032758 NA coding downstream 135818 12028495 ~ 12033037 (+)
CI01000009_12050866_12109305 SPEG coding downstream 158096 12050773 ~ 12110098 (+)
CI01000009_12130688_12146560 CTDS1, CTDSP1 coding downstream 238011 12130688 ~ 12146942 (+)
G57792 NA non-coding upstream 57266 11834738 ~ 11834960 (+)
G57719 NA non-coding upstream 69695 11815069 ~ 11822531 (+)
G57790 NA non-coding upstream 104442 11787576 ~ 11787784 (+)
G57789 NA non-coding upstream 104900 11786904 ~ 11787326 (+)
G57787 NA non-coding upstream 111659 11780329 ~ 11780567 (+)
G57813 NA non-coding downstream 45701 11938378 ~ 11938639 (+)
G57724 NA non-coding downstream 274854 12167531 ~ 12168221 (+)
G57737 NA non-coding downstream 278686 12171363 ~ 12172140 (+)
G57850 NA non-coding downstream 295868 12188545 ~ 12188820 (+)
CI01000009_12198114_12221988 NA non-coding downstream 304728 12196699 ~ 12221993 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 other upstream 125282 11761606 ~ 11766944 (+)
CI01000009_09853929_09854476 SAP18 other upstream 2035639 9853929 ~ 9856587 (+)
G56100 NA other upstream 2761940 9129300 ~ 9130286 (+)
G53651 NA other upstream 5643834 6245564 ~ 6248392 (+)
CI01000009_05931829_05943829 KCNH3 other upstream 5959425 5931718 ~ 5943899 (+)
G57811 NA other downstream 41265 11933942 ~ 11935251 (+)
CI01000009_12432736_12435509 NA other downstream 539881 12432538 ~ 12436017 (+)
G57682 NA other downstream 932792 12825469 ~ 12892339 (+)
G57691 NA other downstream 1013767 12906444 ~ 12918465 (+)
G57701 NA other downstream 1113966 13006643 ~ 13023138 (+)

Expression


Co-expression Network