CI01000009_12022660_12022944



Basic Information


Item Value
gene id CI01000009_12022660_12022944
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 12022560 ~ 12023388 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000009_12022660_12022944.mRNA
ACATAAATGTCATATATCACAATAAACTTCAAAGGGTGTAGTCCCTGTCTGAAACGGAGTAACACACAGCCTTATATTAACAATGTGTAACAGTGCGTAAATGTATTTACAAACACAACTGACACAGTGTTTCAAGTATAAAACAGTCGACGGTGCGGTTAAATACAAGCTCACTTACCCAGTTGTTGTGAGGAAGTTTATGCTATTTCACCGTCTGGCGTTGAAGGAGGACGATCTCTTCATCAGGCTGCTCTCTCCGTCCAACCATCATTTTATCACCATCCTGGATTTTTGCCGACTTTCTCTGAACAATCTTCAAATAGAGATGTATTCCCGTAGAGCAGAGGAGCAGGTTTATTCTACGACCGTATTTCATCCGACCTGACGTCAATCTCTCACCTGCTTGCGATGTGCGCAGCGTCAGTGTGCTCGTGGGACTGCCTTCATTTCCACTGATGTCATTAGCAACAGTGACACCCTATTTCGTTTTTTAATTGCTGATTTTTTTTTTTTTTAGATTTGAAGTTTTCCCGTATAGTCTCTAACCAAGAGAAGATGTTATGTCTAAGGTGAAGCATATGTTGATAATGTTTGGGATTTTGAATGAATCAAAATAGACTTTAATATCGTTTAATATGGTTATTTTCTAGGGTTAAATTACTGCTGGATTAACAATGCATTTTAATATGAAATTTGATTCCATTTCTTAACAAACTTTTTCCCCCCTGAGTATACAGAATAGCATAACCATTTATTTTGACCGGTGAGCTCGTGCAATGTAATCAAACTGTAGATATTGTGATAAAACAGCGACATCTACCGGCGCACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000009_12022660_12022944.mRNA True 829 mRNA 0.38 1 12022560 12023388

Neighbor


gene id symbol gene type direction distance location
CI01000009_11993879_12004644 NEMP2 coding upstream 17795 11993644 ~ 12004765 (+)
CI01000009_11892226_11892558 NA coding upstream 129883 11892226 ~ 11892677 (+)
CI01000009_11875722_11882183 STAT1B, STAT1 coding upstream 139639 11875486 ~ 11882921 (+)
CI01000009_11835682_11873220 STAT4 coding upstream 149230 11835682 ~ 11873330 (+)
CI01000009_11803818_11808988 SLC40A1 coding upstream 213325 11802384 ~ 11809235 (+)
CI01000009_12028975_12032758 NA coding downstream 5107 12028495 ~ 12033037 (+)
CI01000009_12050866_12109305 SPEG coding downstream 27385 12050773 ~ 12110098 (+)
CI01000009_12130688_12146560 CTDS1, CTDSP1 coding downstream 107300 12130688 ~ 12146942 (+)
CI01000009_12198114_12221988 NA coding downstream 173311 12196699 ~ 12221993 (+)
CI01000009_12249416_12290497 COL18A1 coding downstream 225575 12248963 ~ 12290598 (+)
G57813 NA non-coding upstream 83921 11938378 ~ 11938639 (+)
G57792 NA non-coding upstream 187600 11834738 ~ 11834960 (+)
G57719 NA non-coding upstream 200029 11815069 ~ 11822531 (+)
G57790 NA non-coding upstream 234776 11787576 ~ 11787784 (+)
G57789 NA non-coding upstream 235234 11786904 ~ 11787326 (+)
G57724 NA non-coding downstream 144143 12167531 ~ 12168221 (+)
G57737 NA non-coding downstream 147975 12171363 ~ 12172140 (+)
G57850 NA non-coding downstream 165157 12188545 ~ 12188820 (+)
G57704 NA non-coding downstream 282251 12305639 ~ 12372174 (+)
G57811 NA other upstream 87309 11933942 ~ 11935251 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 other upstream 255616 11761606 ~ 11766944 (+)
CI01000009_09853929_09854476 SAP18 other upstream 2165973 9853929 ~ 9856587 (+)
G56100 NA other upstream 2892274 9129300 ~ 9130286 (+)
G53651 NA other upstream 5774168 6245564 ~ 6248392 (+)
CI01000009_12432736_12435509 NA other downstream 409170 12432538 ~ 12436017 (+)
G57682 NA other downstream 802081 12825469 ~ 12892339 (+)
G57691 NA other downstream 883056 12906444 ~ 12918465 (+)
G57701 NA other downstream 983255 13006643 ~ 13023138 (+)
G58028 NA other downstream 1116990 13140378 ~ 13143608 (+)

Expression



Co-expression Network