G205521


Basic Information

Item Value
gene id G205521
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 15066072 ~ 15066282 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU278818
caggattaactgtggacgctgtaagaggaagctgtctgaaagggatgttcgggtgctaacccggattgtatccaaaaaacataaaaccacggctgatcaaatcacgacagaattcaatgtgcacctcaactctcctgtttccaccagaactgtccgtcaccacaatcaattattgtgctctaaaaccaggtgtttcagtttcattgtccaa

Function

GO:

id name namespace
GO:0006749 glutathione metabolic process biological_process
GO:0006790 sulfur compound metabolic process biological_process
GO:0006575 cellular modified amino acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278818 True 211 lncRNA 0.44 1 15066072 15066282

Neighbor

gene id symbol gene type direction distance location
btk btk coding downstream 1093043 13941252 ~ 13973029 (-)
timm8a timm8a,LOC107593201,LOC107680336,LOC107742474 coding downstream 1135160 13928962 ~ 13930912 (-)
sil1 NA coding downstream 1167359 13889589 ~ 13898713 (-)
csnk1a1 csnk1a1,LOC106611977,LOC107554841,LOC107742481,LOC106604944,LOC107593197 coding downstream 1178986 13859221 ~ 13887086 (-)
hspa9 hspa9,LOC106604950,LOC106611979 coding downstream 1267439 13780145 ~ 13798633 (-)
LOC111195849 NA coding upstream 960435 16026717 ~ 16027163 (-)
LOC103026525 LOC108427881 coding upstream 977896 16044178 ~ 16142579 (-)
trnae-uuc_23 NA coding upstream 1077006 16143288 ~ 16143359 (-)
cenpi cenpi coding upstream 1429074 16495356 ~ 16521829 (-)
tmem35a tmem35a,tmem35,LOC107724834,LOC107688707 coding upstream 1456804 16523086 ~ 16527085 (-)
G205509 NA non-coding downstream 110038 14955488 ~ 14956034 (-)
G205506 NA non-coding downstream 112906 14952766 ~ 14953166 (-)
G205505 NA non-coding downstream 113532 14951784 ~ 14952540 (-)
G205489 NA non-coding downstream 297955 14749387 ~ 14768117 (-)
G205462 NA non-coding downstream 719645 14338278 ~ 14346427 (-)
LOC111195866 NA non-coding upstream 41247 15107529 ~ 15115381 (-)
G205563 NA non-coding upstream 225176 15291458 ~ 15291661 (-)
G205614 NA non-coding upstream 283157 15349439 ~ 15349969 (-)
G205617 NA non-coding upstream 286346 15352628 ~ 15352912 (-)
G205623 NA non-coding upstream 341133 15407415 ~ 15407792 (-)
LOC103033354 hnrnpa0b,LOC108269291,LOC107742478,LOC107680980,LOC107740136,LOC108427887,LOC107593198,LOC107554842,LOC107680347 other downstream 1015510 13942723 ~ 14050562 (-)
LOC103035169 LOC108427892,LOC107740141,LOC107554835,LOC107593202,LOC108268827 other downstream 1087622 13974677 ~ 13978450 (-)
LOC103033675 LOC108410893 other downstream 1147687 13902203 ~ 13918385 (-)
G205375 NA other downstream 1288451 13744353 ~ 13777621 (-)
LOC111195729 NA other downstream 1326151 13733713 ~ 13739921 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683 other upstream 341662 15407944 ~ 15567635 (-)
G205640 NA other upstream 477635 15543917 ~ 15545622 (-)
G205670 NA other upstream 765368 15831650 ~ 15832094 (-)
drp2 drp2,LOC107724836,LOC107593231 other upstream 1137655 16203937 ~ 16365647 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other upstream 2193504 17259786 ~ 17300993 (-)

Expression


Co-expression Network