G205625


Basic Information

Item Value
gene id G205625
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 15449203 ~ 15449590 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU278944
taaaaatctgataaaaagaaaagctgtatatataagagCACCTCATGTTATAAGATCTCAACAAACTGTGATACTACAAAATATCTAACTCATCCAGAATggatgatatatatatagagtgtaTTTTCTGATACACAGGGTTGCTATGGAAttgctgttggttgctaaggtgttactatgtggttgctgtggaaaattattagttgctaaggtgttactatgtGGTTGCTTTGGAAAAGGATTgggtgctaagctgttactatgtggttgctgtggaaaagaattggttgctaaggtgtcgctatgtggttgctgtggaaaaggattggtttctaaggtgttacTTTATGGTTGCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278944 True 358 lncRNA 0.36 2 15449203 15449590

Neighbor

gene id symbol gene type direction distance location
btk btk coding downstream 1476174 13941252 ~ 13973029 (-)
timm8a timm8a,LOC107593201,LOC107680336,LOC107742474 coding downstream 1518291 13928962 ~ 13930912 (-)
sil1 NA coding downstream 1550490 13889589 ~ 13898713 (-)
csnk1a1 csnk1a1,LOC106611977,LOC107554841,LOC107742481,LOC106604944,LOC107593197 coding downstream 1562117 13859221 ~ 13887086 (-)
hspa9 hspa9,LOC106604950,LOC106611979 coding downstream 1650570 13780145 ~ 13798633 (-)
LOC111195849 NA coding upstream 577127 16026717 ~ 16027163 (-)
LOC103026525 LOC108427881 coding upstream 594588 16044178 ~ 16142579 (-)
trnae-uuc_23 NA coding upstream 693698 16143288 ~ 16143359 (-)
cenpi cenpi coding upstream 1045766 16495356 ~ 16521829 (-)
tmem35a tmem35a,tmem35,LOC107724834,LOC107688707 coding upstream 1073496 16523086 ~ 16527085 (-)
G205623 NA non-coding downstream 41411 15407415 ~ 15407792 (-)
G205617 NA non-coding downstream 96291 15352628 ~ 15352912 (-)
G205614 NA non-coding downstream 99234 15349439 ~ 15349969 (-)
G205563 NA non-coding downstream 157542 15291458 ~ 15291661 (-)
LOC111195866 NA non-coding downstream 333822 15107529 ~ 15115381 (-)
G205630 NA non-coding upstream 50518 15500108 ~ 15500476 (-)
G205631 NA non-coding upstream 57594 15507184 ~ 15508730 (-)
G205632 NA non-coding upstream 62973 15512563 ~ 15529634 (-)
G205637 NA non-coding upstream 81439 15531029 ~ 15532394 (-)
G205641 NA non-coding upstream 96112 15545702 ~ 15548570 (-)
LOC103033354 hnrnpa0b,LOC108269291,LOC107742478,LOC107680980,LOC107740136,LOC108427887,LOC107593198,LOC107554842,LOC107680347 other downstream 1398641 13942723 ~ 14050562 (-)
LOC103035169 LOC108427892,LOC107740141,LOC107554835,LOC107593202,LOC108268827 other downstream 1470753 13974677 ~ 13978450 (-)
LOC103033675 LOC108410893 other downstream 1530818 13902203 ~ 13918385 (-)
G205375 NA other downstream 1671582 13744353 ~ 13777621 (-)
LOC111195729 NA other downstream 1709282 13733713 ~ 13739921 (-)
G205640 NA other upstream 94327 15543917 ~ 15545622 (-)
G205670 NA other upstream 382060 15831650 ~ 15832094 (-)
drp2 drp2,LOC107724836,LOC107593231 other upstream 754347 16203937 ~ 16365647 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other upstream 1810196 17259786 ~ 17300993 (-)
LOC103033759 NA other upstream 2394376 17843966 ~ 17852191 (-)

Expression


Co-expression Network