G205630


Basic Information

Item Value
gene id G205630
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 15500108 ~ 15500476 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU278949
tcgactaatcgttaattgttaataagtaaataataattaaattcagCTTTAACAGGCAAATGCAGATTAAAAGAGATAAAGGACAAAaatggaaggagagagagagaaaattgaTGAATCAGTTGTTTAGACAAAAATAtAACAAATCGAACTGGTCATTCgattaatcaactaatcaattaaacaaaaaaaaggataatCAGTTGAGAATAAGAGCAGTCACAGGATGAAGGGGAATGAGGATAAAAGtggaaataaaagagaaacagagaaagtgaataagagtgaaagagatggagagagccAATAAATTAGTTGTTAGAATAATCGACTAACGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278949 True 339 lncRNA 0.30 2 15500108 15500476

Neighbor

gene id symbol gene type direction distance location
btk btk coding downstream 1527079 13941252 ~ 13973029 (-)
timm8a timm8a,LOC107593201,LOC107680336,LOC107742474 coding downstream 1569196 13928962 ~ 13930912 (-)
sil1 NA coding downstream 1601395 13889589 ~ 13898713 (-)
csnk1a1 csnk1a1,LOC106611977,LOC107554841,LOC107742481,LOC106604944,LOC107593197 coding downstream 1613022 13859221 ~ 13887086 (-)
hspa9 hspa9,LOC106604950,LOC106611979 coding downstream 1701475 13780145 ~ 13798633 (-)
LOC111195849 NA coding upstream 526241 16026717 ~ 16027163 (-)
LOC103026525 LOC108427881 coding upstream 543702 16044178 ~ 16142579 (-)
trnae-uuc_23 NA coding upstream 642812 16143288 ~ 16143359 (-)
cenpi cenpi coding upstream 994880 16495356 ~ 16521829 (-)
tmem35a tmem35a,tmem35,LOC107724834,LOC107688707 coding upstream 1022610 16523086 ~ 16527085 (-)
G205625 NA non-coding downstream 50518 15449203 ~ 15449590 (-)
G205623 NA non-coding downstream 92316 15407415 ~ 15407792 (-)
G205617 NA non-coding downstream 147196 15352628 ~ 15352912 (-)
G205614 NA non-coding downstream 150139 15349439 ~ 15349969 (-)
G205563 NA non-coding downstream 208447 15291458 ~ 15291661 (-)
G205631 NA non-coding upstream 6708 15507184 ~ 15508730 (-)
G205632 NA non-coding upstream 12087 15512563 ~ 15529634 (-)
G205637 NA non-coding upstream 30553 15531029 ~ 15532394 (-)
G205641 NA non-coding upstream 45226 15545702 ~ 15548570 (-)
G205643 NA non-coding upstream 72809 15573285 ~ 15617923 (-)
LOC103033354 hnrnpa0b,LOC108269291,LOC107742478,LOC107680980,LOC107740136,LOC108427887,LOC107593198,LOC107554842,LOC107680347 other downstream 1449546 13942723 ~ 14050562 (-)
LOC103035169 LOC108427892,LOC107740141,LOC107554835,LOC107593202,LOC108268827 other downstream 1521658 13974677 ~ 13978450 (-)
LOC103033675 LOC108410893 other downstream 1581723 13902203 ~ 13918385 (-)
G205375 NA other downstream 1722487 13744353 ~ 13777621 (-)
LOC111195729 NA other downstream 1760187 13733713 ~ 13739921 (-)
G205640 NA other upstream 43441 15543917 ~ 15545622 (-)
G205670 NA other upstream 331174 15831650 ~ 15832094 (-)
drp2 drp2,LOC107724836,LOC107593231 other upstream 703461 16203937 ~ 16365647 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other upstream 1759310 17259786 ~ 17300993 (-)
LOC103033759 NA other upstream 2343490 17843966 ~ 17852191 (-)

Expression


Co-expression Network