G205643


Basic Information

Item Value
gene id G205643
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 15573285 ~ 15617923 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU278966
cctctggaatataatcaagaggaagatggatgatcacaaaccatcaaaccaccaaactgaactgcttgaatttttgcaccaggagtaaagcagcataaagttatccaaaagcagtgtgtaagactggtggaggagaacatgatgatgaaccagggttattccaccaaatattgatttctgaactcttaaaactttttgaatatgaactt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278966 True 209 lncRNA 0.37 3 15573285 15617923

Neighbor

gene id symbol gene type direction distance location
btk btk coding downstream 1600256 13941252 ~ 13973029 (-)
timm8a timm8a,LOC107593201,LOC107680336,LOC107742474 coding downstream 1642373 13928962 ~ 13930912 (-)
sil1 NA coding downstream 1674572 13889589 ~ 13898713 (-)
csnk1a1 csnk1a1,LOC106611977,LOC107554841,LOC107742481,LOC106604944,LOC107593197 coding downstream 1686199 13859221 ~ 13887086 (-)
hspa9 hspa9,LOC106604950,LOC106611979 coding downstream 1774652 13780145 ~ 13798633 (-)
LOC111195849 NA coding upstream 408794 16026717 ~ 16027163 (-)
LOC103026525 LOC108427881 coding upstream 426255 16044178 ~ 16142579 (-)
trnae-uuc_23 NA coding upstream 525365 16143288 ~ 16143359 (-)
cenpi cenpi coding upstream 877433 16495356 ~ 16521829 (-)
tmem35a tmem35a,tmem35,LOC107724834,LOC107688707 coding upstream 905163 16523086 ~ 16527085 (-)
G205641 NA non-coding downstream 24715 15545702 ~ 15548570 (-)
G205637 NA non-coding downstream 40891 15531029 ~ 15532394 (-)
G205632 NA non-coding downstream 43651 15512563 ~ 15529634 (-)
G205631 NA non-coding downstream 64555 15507184 ~ 15508730 (-)
G205630 NA non-coding downstream 72809 15500108 ~ 15500476 (-)
G205660 NA non-coding upstream 65119 15683042 ~ 15684079 (-)
G205663 NA non-coding upstream 109928 15727851 ~ 15728967 (-)
G205667 NA non-coding upstream 181880 15799803 ~ 15800274 (-)
G205778 NA non-coding upstream 214374 15832297 ~ 15938295 (-)
G205782 NA non-coding upstream 263748 15881671 ~ 15882056 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683 other downstream 5650 15407944 ~ 15567635 (-)
G205640 NA other downstream 27663 15543917 ~ 15545622 (-)
LOC103033354 hnrnpa0b,LOC108269291,LOC107742478,LOC107680980,LOC107740136,LOC108427887,LOC107593198,LOC107554842,LOC107680347 other downstream 1522723 13942723 ~ 14050562 (-)
LOC103035169 LOC108427892,LOC107740141,LOC107554835,LOC107593202,LOC108268827 other downstream 1594835 13974677 ~ 13978450 (-)
LOC103033675 LOC108410893 other downstream 1654900 13902203 ~ 13918385 (-)
G205670 NA other upstream 213727 15831650 ~ 15832094 (-)
drp2 drp2,LOC107724836,LOC107593231 other upstream 586014 16203937 ~ 16365647 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other upstream 1641863 17259786 ~ 17300993 (-)
LOC103033759 NA other upstream 2226043 17843966 ~ 17852191 (-)
LOC111195732 NA other upstream 2421752 18039675 ~ 18041939 (-)

Expression


Co-expression Network