G205660


Basic Information

Item Value
gene id G205660
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 15683042 ~ 15684079 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU278985
aacctggattagaacattactcaaatattcactattcactgtatacctgtaactctacctcttcactactttactttaactgatgctctcaaacactttattaagagacaagaaattcaagtaattaactcttgatgagttcagcacagctgttaactgaaagcctgaattccaggtgactctacctcataaagctgactgagaaaatcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278985 True 210 lncRNA 0.36 2 15683042 15684079

Neighbor

gene id symbol gene type direction distance location
btk btk coding downstream 1710013 13941252 ~ 13973029 (-)
timm8a timm8a,LOC107593201,LOC107680336,LOC107742474 coding downstream 1752130 13928962 ~ 13930912 (-)
sil1 NA coding downstream 1784329 13889589 ~ 13898713 (-)
csnk1a1 csnk1a1,LOC106611977,LOC107554841,LOC107742481,LOC106604944,LOC107593197 coding downstream 1795956 13859221 ~ 13887086 (-)
hspa9 hspa9,LOC106604950,LOC106611979 coding downstream 1884409 13780145 ~ 13798633 (-)
LOC111195849 NA coding upstream 342638 16026717 ~ 16027163 (-)
LOC103026525 LOC108427881 coding upstream 360099 16044178 ~ 16142579 (-)
trnae-uuc_23 NA coding upstream 459209 16143288 ~ 16143359 (-)
cenpi cenpi coding upstream 811277 16495356 ~ 16521829 (-)
tmem35a tmem35a,tmem35,LOC107724834,LOC107688707 coding upstream 839007 16523086 ~ 16527085 (-)
G205643 NA non-coding downstream 65119 15573285 ~ 15617923 (-)
G205646 NA non-coding downstream 71337 15597147 ~ 15611705 (-)
G205641 NA non-coding downstream 134472 15545702 ~ 15548570 (-)
G205637 NA non-coding downstream 150648 15531029 ~ 15532394 (-)
G205632 NA non-coding downstream 153408 15512563 ~ 15529634 (-)
G205663 NA non-coding upstream 43772 15727851 ~ 15728967 (-)
G205667 NA non-coding upstream 115724 15799803 ~ 15800274 (-)
G205778 NA non-coding upstream 148218 15832297 ~ 15938295 (-)
G205782 NA non-coding upstream 197592 15881671 ~ 15882056 (-)
G205795 NA non-coding upstream 330150 16014229 ~ 16014683 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683 other downstream 115407 15407944 ~ 15567635 (-)
G205640 NA other downstream 137420 15543917 ~ 15545622 (-)
LOC103033354 hnrnpa0b,LOC108269291,LOC107742478,LOC107680980,LOC107740136,LOC108427887,LOC107593198,LOC107554842,LOC107680347 other downstream 1632480 13942723 ~ 14050562 (-)
LOC103035169 LOC108427892,LOC107740141,LOC107554835,LOC107593202,LOC108268827 other downstream 1704592 13974677 ~ 13978450 (-)
LOC103033675 LOC108410893 other downstream 1764657 13902203 ~ 13918385 (-)
G205670 NA other upstream 147571 15831650 ~ 15832094 (-)
drp2 drp2,LOC107724836,LOC107593231 other upstream 519858 16203937 ~ 16365647 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other upstream 1575707 17259786 ~ 17300993 (-)
LOC103033759 NA other upstream 2159887 17843966 ~ 17852191 (-)
LOC111195732 NA other upstream 2355596 18039675 ~ 18041939 (-)

Expression


Co-expression Network