G205778


Basic Information

Item Value
gene id G205778
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 15832297 ~ 15938295 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU279126
attttaccaaattgaaaacctctggaatataatcaagaggaagatggatgatcacaaaccatcaaaccaccaaactgaactgcttgaatttttgcaccaggagtaaagcagcataaagttatccaaaagcagtgtgtaagactggtggaggagaacatgatgccaagatgcatgaaaacaaaaactgtgattaaaaaccaaccagggttattccaccaaatattgatttctgaactcttaaaactttatgaatatgaacttg
>TU279127
caaactgaactgcttgaatgtttgcaccaggagtaaagcagcatgaagttatccaaaagcagtgtgtaagactggtggaggagaacatgatgcagagatgcatgaaaaaactgtgattaaaaaccaaccagggttattccaccaaatattgatttctgaactcttaaaactttagccatttctcattttctgtaaataaatgctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279126 True 262 lncRNA 0.35 2 15832394 15938295
TU279127 False 206 lncRNA 0.37 2 15832297 15832581

Neighbor

gene id symbol gene type direction distance location
btk btk coding downstream 1859268 13941252 ~ 13973029 (-)
timm8a timm8a,LOC107593201,LOC107680336,LOC107742474 coding downstream 1901385 13928962 ~ 13930912 (-)
sil1 NA coding downstream 1933584 13889589 ~ 13898713 (-)
csnk1a1 csnk1a1,LOC106611977,LOC107554841,LOC107742481,LOC106604944,LOC107593197 coding downstream 1945211 13859221 ~ 13887086 (-)
hspa9 hspa9,LOC106604950,LOC106611979 coding downstream 2033664 13780145 ~ 13798633 (-)
LOC111195849 NA coding upstream 88422 16026717 ~ 16027163 (-)
LOC103026525 LOC108427881 coding upstream 105883 16044178 ~ 16142579 (-)
trnae-uuc_23 NA coding upstream 204993 16143288 ~ 16143359 (-)
cenpi cenpi coding upstream 557061 16495356 ~ 16521829 (-)
tmem35a tmem35a,tmem35,LOC107724834,LOC107688707 coding upstream 584791 16523086 ~ 16527085 (-)
G205667 NA non-coding downstream 32023 15799803 ~ 15800274 (-)
G205663 NA non-coding downstream 103330 15727851 ~ 15728967 (-)
G205660 NA non-coding downstream 148218 15683042 ~ 15684079 (-)
G205643 NA non-coding downstream 214374 15573285 ~ 15617923 (-)
G205646 NA non-coding downstream 220592 15597147 ~ 15611705 (-)
G205795 NA non-coding upstream 75934 16014229 ~ 16014683 (-)
G205799 NA non-coding upstream 115741 16054036 ~ 16091671 (-)
G205800 NA non-coding upstream 127289 16065584 ~ 16066716 (-)
G205812 NA non-coding upstream 257811 16196106 ~ 16200003 (-)
G205814 NA non-coding upstream 404946 16343241 ~ 16347559 (-)
G205670 NA other downstream 203 15831650 ~ 15832094 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683 other downstream 264662 15407944 ~ 15567635 (-)
G205640 NA other downstream 286675 15543917 ~ 15545622 (-)
LOC103033354 hnrnpa0b,LOC108269291,LOC107742478,LOC107680980,LOC107740136,LOC108427887,LOC107593198,LOC107554842,LOC107680347 other downstream 1781735 13942723 ~ 14050562 (-)
LOC103035169 LOC108427892,LOC107740141,LOC107554835,LOC107593202,LOC108268827 other downstream 1853847 13974677 ~ 13978450 (-)
drp2 drp2,LOC107724836,LOC107593231 other upstream 265642 16203937 ~ 16365647 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other upstream 1321491 17259786 ~ 17300993 (-)
LOC103033759 NA other upstream 1905671 17843966 ~ 17852191 (-)
LOC111195732 NA other upstream 2101380 18039675 ~ 18041939 (-)
G206575 NA other upstream 2900074 18838369 ~ 18838916 (-)

Expression


Co-expression Network