G206018


Basic Information

Item Value
gene id G206018
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 16930762 ~ 16931351 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU279440
GCTATTacataaagtaaacaaaataagGGAACACTGCAAATCAGTAAGagaaatcaaaataataaatggtAGATAGTGATACTTTCAACTACAAATCCAAAGTTCAGTGACTACACACCACTCCAGTACTATACAAATAGCATTCACTTTCCTAAGCTTATCGCCCACAAGTAGCTTAGTTGGCCAGATCTAGACTTTGTTACCAATAAtagaacataaacataaaaataaaaaataaataaatgctctaccaAGAGTTCTGAGCAGCACATACActtattttgtaaaaagaaaCAGCAATTGCTGTAAAAATACCTTTACAAGAAACGTCTAAAAGAAAACATCAGCTAAAAGAAAACAGCAGCTAGCCCTATTAAACGAATCTGGCAtcccacacacaaacagcacGTTTATCGTTCTCCCAGTCAGCGTAGTAGCACGGCGTACTGCAGTTCAGCTGTCGTTAACTTCAGAGCTCTCTATATTACTCAGTGCCGCGGCACACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279440 True 506 lncRNA 0.37 2 16930762 16931351

Neighbor

gene id symbol gene type direction distance location
clint1 LOC108427862 coding downstream 95263 16803521 ~ 16835499 (-)
LOC103042614 LOC106936709 coding downstream 138232 16788501 ~ 16792530 (-)
trmt12 NA coding downstream 149527 16776472 ~ 16781235 (-)
sytl4 sytl4 coding downstream 157455 16747192 ~ 16773307 (-)
tspan6 tspan6 coding downstream 204423 16720472 ~ 16726339 (-)
LOC103044170 ebf1,ebf1a,LOC107669108,LOC107602553 coding upstream 22473 16953824 ~ 17199398 (-)
LOC103024939 ebf1,ebf1a coding upstream 268122 17199473 ~ 17246825 (-)
LOC103041682 NA coding upstream 380582 17311933 ~ 17319469 (-)
sh3tc2 sh3tc2 coding upstream 628908 17560259 ~ 17597003 (-)
LOC103035473 gabrp,LOC108427849,LOC107752068,LOC107664365 coding upstream 922321 17853672 ~ 17865149 (-)
G206017 NA non-coding downstream 618 16929788 ~ 16930144 (-)
G206000 NA non-coding downstream 127825 16801936 ~ 16802937 (-)
G206007 NA non-coding downstream 132046 16793056 ~ 16798716 (-)
G206004 NA non-coding downstream 143374 16786677 ~ 16787388 (-)
G206006 rnaseh2c non-coding downstream 145704 16782126 ~ 16785058 (-)
G206029 NA non-coding upstream 63168 16994519 ~ 16996459 (-)
G206099 NA non-coding upstream 219158 17150509 ~ 17151049 (-)
G206142 NA non-coding upstream 347468 17278819 ~ 17279196 (-)
G206149 NA non-coding upstream 405590 17336941 ~ 17337141 (-)
G206154 NA non-coding upstream 424762 17356113 ~ 17356466 (-)
drp2 drp2,LOC107724836,LOC107593231 other downstream 565115 16203937 ~ 16365647 (-)
G205670 NA other downstream 1098668 15831650 ~ 15832094 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683 other downstream 1363127 15407944 ~ 15567635 (-)
G205640 NA other downstream 1385140 15543917 ~ 15545622 (-)
LOC103035169 LOC108427892,LOC107740141,LOC107554835,LOC107593202,LOC108268827 other downstream 2952312 13974677 ~ 13978450 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other upstream 328435 17259786 ~ 17300993 (-)
LOC103033759 NA other upstream 912615 17843966 ~ 17852191 (-)
LOC111195732 NA other upstream 1108324 18039675 ~ 18041939 (-)
G206575 NA other upstream 1907018 18838369 ~ 18838916 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other upstream 2106343 19037694 ~ 19127726 (-)

Expression


Co-expression Network