G206099


Basic Information

Item Value
gene id G206099
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 17150509 ~ 17151049 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU279530
atctatctatctatctatctatctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctactgtctgtctgtctacctgcctacctacctacctacctgtctgtctgtatatctatcaattagtctgtctgtctgtctgtctatatatttataaatcagtttatctgtctatctaccACTATATCCATATATGtggttctatctatctatctgtctatctatctatctatctgtctgtctgtctgtctgtctgtctgtctatcaatcAGTCTACCTGTTTGTCCATCCGTCCGtccatctatatatctatcagtcagattgtctgtctgtctgtctatcaatcagtctatgtctgtctgtcagtccgTCTGTCAGTCCGTCTGTCGGTCCGTCTATCCATATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279530 True 445 lncRNA 0.41 2 17150509 17151049

Neighbor

gene id symbol gene type direction distance location
clint1 LOC108427862 coding downstream 315010 16803521 ~ 16835499 (-)
LOC103042614 LOC106936709 coding downstream 357979 16788501 ~ 16792530 (-)
trmt12 NA coding downstream 369274 16776472 ~ 16781235 (-)
sytl4 sytl4 coding downstream 377202 16747192 ~ 16773307 (-)
tspan6 tspan6 coding downstream 424170 16720472 ~ 16726339 (-)
LOC103024939 ebf1,ebf1a coding upstream 48424 17199473 ~ 17246825 (-)
LOC103041682 NA coding upstream 160884 17311933 ~ 17319469 (-)
sh3tc2 sh3tc2 coding upstream 409210 17560259 ~ 17597003 (-)
LOC103035473 gabrp,LOC108427849,LOC107752068,LOC107664365 coding upstream 702623 17853672 ~ 17865149 (-)
prelid1 prelid1,prelid1a,LOC107551005,LOC107706737,LOC107660432,LOC107558055,LOC107712305 coding upstream 735243 17886292 ~ 17890574 (-)
G206029 NA non-coding downstream 154050 16994519 ~ 16996459 (-)
G206018 NA non-coding downstream 219158 16930762 ~ 16931351 (-)
G206017 NA non-coding downstream 220365 16929788 ~ 16930144 (-)
G206000 NA non-coding downstream 347572 16801936 ~ 16802937 (-)
G206007 NA non-coding downstream 351793 16793056 ~ 16798716 (-)
G206142 NA non-coding upstream 127770 17278819 ~ 17279196 (-)
G206149 NA non-coding upstream 185892 17336941 ~ 17337141 (-)
G206154 NA non-coding upstream 205064 17356113 ~ 17356466 (-)
G206164 NA non-coding upstream 269879 17420928 ~ 17421193 (-)
G206172 NA non-coding upstream 299283 17450332 ~ 17450645 (-)
drp2 drp2,LOC107724836,LOC107593231 other downstream 784862 16203937 ~ 16365647 (-)
G205670 NA other downstream 1318415 15831650 ~ 15832094 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683 other downstream 1582874 15407944 ~ 15567635 (-)
G205640 NA other downstream 1604887 15543917 ~ 15545622 (-)
LOC103035169 LOC108427892,LOC107740141,LOC107554835,LOC107593202,LOC108268827 other downstream 3172059 13974677 ~ 13978450 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other upstream 108737 17259786 ~ 17300993 (-)
LOC103033759 NA other upstream 692917 17843966 ~ 17852191 (-)
LOC111195732 NA other upstream 888626 18039675 ~ 18041939 (-)
G206575 NA other upstream 1687320 18838369 ~ 18838916 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other upstream 1886645 19037694 ~ 19127726 (-)

Expression


Co-expression Network