G206142


Basic Information

Item Value
gene id G206142
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 17278819 ~ 17279196 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU279582
cttttcagaagcttgtttgccacttattgtcctttgtatacagctggtacagcatcttttaaggtcccccgggaaaattccgttgtgttgtgactcacttccgttgtgttgtggttctatttgcagcgcatttttctttttgcagcgcgtttttctatttgcagcgcgtttttctatttgcagcgcctgtgttgtaattttgatggatgtgttttgtgcttttgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279582 True 226 lncRNA 0.42 2 17278819 17279196

Neighbor

gene id symbol gene type direction distance location
LOC103024939 ebf1,ebf1a coding downstream 31994 17199473 ~ 17246825 (-)
LOC103044170 ebf1,ebf1a,LOC107669108,LOC107602553 coding downstream 79421 16953824 ~ 17199398 (-)
clint1 LOC108427862 coding downstream 443320 16803521 ~ 16835499 (-)
LOC103042614 LOC106936709 coding downstream 486289 16788501 ~ 16792530 (-)
trmt12 NA coding downstream 497584 16776472 ~ 16781235 (-)
LOC103041682 NA coding upstream 32737 17311933 ~ 17319469 (-)
sh3tc2 sh3tc2 coding upstream 281063 17560259 ~ 17597003 (-)
LOC103035473 gabrp,LOC108427849,LOC107752068,LOC107664365 coding upstream 574476 17853672 ~ 17865149 (-)
prelid1 prelid1,prelid1a,LOC107551005,LOC107706737,LOC107660432,LOC107558055,LOC107712305 coding upstream 607096 17886292 ~ 17890574 (-)
LOC103037035 npy7r,LOC108436162,LOC108268504,LOC107660446,LOC107558042,LOC107712299 coding upstream 612672 17891868 ~ 17898561 (-)
G206099 NA non-coding downstream 127770 17150509 ~ 17151049 (-)
G206029 NA non-coding downstream 282360 16994519 ~ 16996459 (-)
G206018 NA non-coding downstream 347468 16930762 ~ 16931351 (-)
G206017 NA non-coding downstream 348675 16929788 ~ 16930144 (-)
G206000 NA non-coding downstream 475882 16801936 ~ 16802937 (-)
G206149 NA non-coding upstream 57745 17336941 ~ 17337141 (-)
G206154 NA non-coding upstream 76917 17356113 ~ 17356466 (-)
G206164 NA non-coding upstream 141732 17420928 ~ 17421193 (-)
G206172 NA non-coding upstream 171136 17450332 ~ 17450645 (-)
G206203 NA non-coding upstream 176083 17455279 ~ 17552141 (-)
drp2 drp2,LOC107724836,LOC107593231 other downstream 913172 16203937 ~ 16365647 (-)
G205670 NA other downstream 1446725 15831650 ~ 15832094 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683 other downstream 1711184 15407944 ~ 15567635 (-)
G205640 NA other downstream 1733197 15543917 ~ 15545622 (-)
LOC103035169 LOC108427892,LOC107740141,LOC107554835,LOC107593202,LOC108268827 other downstream 3300369 13974677 ~ 13978450 (-)
LOC103033759 NA other upstream 564770 17843966 ~ 17852191 (-)
LOC111195732 NA other upstream 760479 18039675 ~ 18041939 (-)
G206575 NA other upstream 1559173 18838369 ~ 18838916 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other upstream 1758498 19037694 ~ 19127726 (-)
LOC103046671 NA other upstream 2645835 19925031 ~ 19994802 (-)

Expression


Co-expression Network