G206149


Basic Information

Item Value
gene id G206149
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 17336941 ~ 17337141 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU279589
GTtggctttctgttctttatatttatttggtgcgGTATAGGAGCCCCCCAtatagcattacagtactacatgTATATGCGACACAAATGTAagctgtttttacagtttttacacaaTGTATATGTAGCCGGTCTGAACTCTGCTGCTACCCTCTTCTGcgttgtgtgtgtatggaatAAAGCTCAGGACACCGGAATCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279589 True 201 lncRNA 0.42 1 17336941 17337141

Neighbor

gene id symbol gene type direction distance location
LOC103041682 NA coding downstream 17472 17311933 ~ 17319469 (-)
LOC103024939 ebf1,ebf1a coding downstream 90116 17199473 ~ 17246825 (-)
LOC103044170 ebf1,ebf1a,LOC107669108,LOC107602553 coding downstream 137543 16953824 ~ 17199398 (-)
clint1 LOC108427862 coding downstream 501442 16803521 ~ 16835499 (-)
LOC103042614 LOC106936709 coding downstream 544411 16788501 ~ 16792530 (-)
sh3tc2 sh3tc2 coding upstream 223118 17560259 ~ 17597003 (-)
LOC103035473 gabrp,LOC108427849,LOC107752068,LOC107664365 coding upstream 516531 17853672 ~ 17865149 (-)
prelid1 prelid1,prelid1a,LOC107551005,LOC107706737,LOC107660432,LOC107558055,LOC107712305 coding upstream 549151 17886292 ~ 17890574 (-)
LOC103037035 npy7r,LOC108436162,LOC108268504,LOC107660446,LOC107558042,LOC107712299 coding upstream 554727 17891868 ~ 17898561 (-)
ergic1 ergic1,LOC107679115,LOC107660430 coding upstream 622819 17959960 ~ 17984069 (-)
G206142 NA non-coding downstream 57745 17278819 ~ 17279196 (-)
G206099 NA non-coding downstream 185892 17150509 ~ 17151049 (-)
G206029 NA non-coding downstream 340482 16994519 ~ 16996459 (-)
G206018 NA non-coding downstream 405590 16930762 ~ 16931351 (-)
G206017 NA non-coding downstream 406797 16929788 ~ 16930144 (-)
G206154 NA non-coding upstream 18972 17356113 ~ 17356466 (-)
G206164 NA non-coding upstream 83787 17420928 ~ 17421193 (-)
G206172 NA non-coding upstream 113191 17450332 ~ 17450645 (-)
G206203 NA non-coding upstream 118138 17455279 ~ 17552141 (-)
G206218 NA non-coding upstream 241144 17578285 ~ 17578684 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other downstream 35948 17259786 ~ 17300993 (-)
drp2 drp2,LOC107724836,LOC107593231 other downstream 971294 16203937 ~ 16365647 (-)
G205670 NA other downstream 1504847 15831650 ~ 15832094 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683 other downstream 1769306 15407944 ~ 15567635 (-)
G205640 NA other downstream 1791319 15543917 ~ 15545622 (-)
LOC103033759 NA other upstream 506825 17843966 ~ 17852191 (-)
LOC111195732 NA other upstream 702534 18039675 ~ 18041939 (-)
G206575 NA other upstream 1501228 18838369 ~ 18838916 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other upstream 1700553 19037694 ~ 19127726 (-)
LOC103046671 NA other upstream 2587890 19925031 ~ 19994802 (-)

Expression


Co-expression Network