CI01000009_12643324_12643737


Basic Information

Item Value
gene id CI01000009_12643324_12643737
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 12643261 ~ 12643988 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_12643324_12643737.mRNA
AGACCTCTTAGCAGTGAAAATTCTAGTGCAAATGTTTATAAACAACAAACCTGTTATTATAAATGATTATTTATTAACTGCTGTCCAGACCTCTTAGCAGTGAAGCCCATGTAAATAGCTTTCAACAACAGAACATGATTATAAATAATTACTTCTCTTTTAATGTCCTTACGTAACTGTTAAATAAAGCAATTTCAAAAACTGTAGAAGATGAACAGCCATATGCCTGTGTACAAGAAGGATTTCAGCTAATGCTGCAGTGTAGCTCAAACTGGCTTGCCAGAGCGCAAATACTGAAATTGGCCTTAAAGGAGTGCAGACAGGGGGTCAGATGTGATGGACAGGAGACACCGACATGCCTGTGCTTGTGTGACAGCTTAGAGGAAACTGCAAGGCCTAACCGTGACAAACAAGCTGCAGGAGTCACAACATTCAGAGCGCCTGCCGATTTACTCGGCATCAACACCCGGAGCTCACAAACAGAGATGGCCACACCACTGTGTGTCCGAAATCACTCCCTGTGTCGGCCATTTGGCAATGCATCATTCTTCACACTCTTTTTTCCAAATCTTTCTTTAAACTTTGCTTTAATGTACTACAAATGTGAAGCTTCTGAGAGAGTGTTATGCAACAGTATTCTGGACATTCGCCATACAGCCATTTAGAAGGAAACAACGACCAATTAATCTCCCATTTAGCCAAGTATAACTCAGGCAGATCGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_12643324_12643737.mRNA True 728 mRNA 0.41 1 12643261 12643988

Neighbor

gene id symbol gene type direction distance location
CI01000009_12531562_12540003 NA coding downstream 102888 12531125 ~ 12540373 (-)
CI01000009_12486758_12498650 CALCRLA, CALCRL coding downstream 144611 12485626 ~ 12498650 (-)
CI01000009_12304891_12322499 NA coding downstream 320337 12304689 ~ 12322924 (-)
CI01000009_12176488_12184112 OBSL1 coding downstream 457601 12176154 ~ 12185660 (-)
CI01000009_12167744_12175422 NA coding downstream 467839 12167744 ~ 12175422 (-)
CI01000009_12659018_12693857 COL5A2 coding upstream 14375 12658363 ~ 12694684 (-)
CI01000009_12711691_12713525 FKBP7 coding upstream 67593 12711581 ~ 12713525 (-)
CI01000009_12715240_12852745 NA coding upstream 71252 12715240 ~ 12852811 (-)
CI01000009_12863333_13023317 NA coding upstream 218632 12862620 ~ 13023317 (-)
CI01000009_13068379_13105228 SESTD1 coding upstream 423462 13067450 ~ 13105228 (-)
G59304 NA non-coding downstream 12104 12630813 ~ 12631157 (-)
G59303 NA non-coding downstream 15637 12627389 ~ 12627624 (-)
G59302 NA non-coding downstream 17102 12625908 ~ 12626159 (-)
G59301 NA non-coding downstream 20669 12622250 ~ 12622592 (-)
G59300 NA non-coding downstream 23667 12619389 ~ 12619594 (-)
G59276 NA non-coding upstream 466647 13110635 ~ 13198396 (-)
CI01000009_13124087_13152851 ZNF385B non-coding upstream 502634 13123994 ~ 13158324 (-)
G59280 NA non-coding upstream 518888 13162876 ~ 13184488 (-)
G59275 NA non-coding upstream 554514 13198502 ~ 13206604 (-)
G59274 NA non-coding upstream 563094 13207082 ~ 13225362 (-)
G59097 NA other downstream 353743 12288217 ~ 12289518 (-)
CI01000009_08858198_08860555 NA other downstream 3782698 8856310 ~ 8860563 (-)
G55814 NA other downstream 4215249 8425821 ~ 8428012 (-)
G53515 NA other downstream 7138013 5502395 ~ 5505248 (-)
G52828 NA other downstream 8411792 4217420 ~ 4231469 (-)
CI01000009_13975122_13976026 NA other upstream 1331400 13975099 ~ 13978614 (-)
G59490 NA other upstream 1389576 14033564 ~ 14037873 (-)
G59811 NA other upstream 2218409 14862397 ~ 14887464 (-)
G59941 NA other upstream 2488116 15132104 ~ 15132503 (-)
CI01000009_15318811_15390382 TNS1 other upstream 2732272 15318811 ~ 15390382 (-)

Expression


Co-expression Network