G206435 (acrc,LOC108268437,LOC102779592,LOC100690020)


Basic Information

Item Value
gene id G206435
gene name acrc,LOC108268437,LOC102779592,LOC100690020
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 18276257 ~ 18278541 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU280076
TTTATCTTGGTTAAATAATGATTCACAGTGTTTTACTGGTTTTGCTGAGGAGTTAATTATTCCAGTTCATTCTGTAAACAGAGATCTGCAGTATAAATGcccaatatttaatattttactgagGAAACAACAGAACTAAAATCTGCAGACCTGCTCTATACCTCACAGGTTTAACAGATTACACCTGCAGAACATCCTGAAAATACCTGAGGCTGATCTGGGGTCAGCTCTGGCTGAGGCGGGTCTTGCTAAAGTCGGCGCTGAGTTTGCGCATCACCTCGGCGTGACTCTGACCGGCTAACTCCTGCCGGACCGGCCCGTAGTTCTCCTTCACAAACGTGGCGAAGGGTGTGGGTCCTCGTGAATTAGCAGGCGTGAGGAGGACCAGCTTCCCCGTGCACAGAGCGCACACAAACCTCTCAGTGTCCAGAGACTTGGAGTGACGACCAATCCTGGAGAAGAACACAGAGGGAGATTTAACACAGCATTCAGGAGTGggaattaaaggagaactctggtgtaaaatggacttttggtatagtaaaacatgataaaaaaaagtgcacaaaaagcttgttattatcagtacagtgatggcggtgctcggagctgaagctactagtgttataggatgtaaacagtggtgtttaataagcttcttctgcacttttaaagttattaatgcctcgtttaaAATATCAggactctccggattctagtaaggaggtgtggagctactttgagctggataacagtgtaaaaagacaGTTTCCAAGACATACAGTTACAATACCTCAACAATTTCATAATTTTGCATGTTATATAATAGTGAATATCCCTTAAAGTCCTGGTTCACCCTTACTAGAATATTAATCTGCAATAAAGGGGGAAAACAAGATTTTATTTGGCCAGATTTCAGCACATAAAGACGGTAAACAatgctgtttaaaaacacaacttCCGTCTATCTGTCTATTGCTGCAGCTACAGTATGCTCTTACCATGTGTGATACATTACGTCAGGGTAGTACACAGGTTCGTGTGCGTTATTGTATAAAGTTTTGCTGTTTAtaactaaaattattaaataaaaactagcaaacctGCTTTAAAAACGAAAAATgtcaaaaagaaacaaaattaaactaACTGAAAATATTActagaactaataaaaactaaactaaaattaaaaacgaataaaaactagcaaaagCAAACACAGATTAGATTATCTGTAACCTGTAATTAGTCAAActtctaaatgaatattaaaccTCATGCTGAGCAGTGAGTGAGGGTCACGTACGTGTTTTTGCAGCGGCTGCACTGATACTGGTATTTGTAGTTGATGTCGTAGCTGTGGCAGCGCGTGACCATGGGCAGCTCAGGGTGAGCCAGCGTAGCTTTACGGGCGTAGATCTTCCAGAACGGTCCGTGACCGTCCCGCACGTTATTTATCAGCCACGTAGCCGCGTGACACATCTCGTGAACCAGCGTGTCCCTCAGCCGATctgtaaaagagaaaaggaTATTAATAACACAACCAGGCAAATCACTGCTGAAGCAAAGTTAGAATAGTTTAGAAAAGTGAATTAGAATTGATTTTTTTACACTCCAATAGTTAGCTTTAGTTagtttttaaaacaggtttgcttgttttttttttattacatattttctgATGATTAgtattagtttagtttttattcattttagtaTTACTTTCAATTagttagattttatttattttagacattttccCCTCCAATTCAGATAGTTTTACTTAGTTTTTAAAGTGGGTTTGTTAGCttcaat

Function

symbol description
acrc acrylyl-CoA reductase (NADH)

NR:

description
PREDICTED: acidic repeat-containing protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280076 True 1817 lncRNA 0.39 2 18276257 18278541

Neighbor

gene id symbol gene type direction distance location
LOC103044938 NA coding downstream 67371 18191791 ~ 18208886 (-)
slbp NA coding downstream 95735 18176707 ~ 18180522 (-)
ccdc142 NA coding downstream 100142 18165988 ~ 18176115 (-)
nkx1-1 nkx1-1,nkx1.2lb,LOC107550996,LOC107706723,LOC107679121 coding downstream 196775 18076055 ~ 18079482 (-)
ergic1 ergic1,LOC107679115,LOC107660430 coding downstream 292188 17959960 ~ 17984069 (-)
LOC103028142 cetn2,LOC108436166,LOC102228171 coding upstream 2092 18280633 ~ 18282899 (-)
fut11 fut11,LOC107689135,LOC107710942,LOC107733430,LOC107663104 coding upstream 59151 18337692 ~ 18343003 (-)
LOC103044618 plp1,LOC107689137,LOC107554657,LOC103135636,LOC103135639,LOC108242072 coding upstream 78448 18356989 ~ 18370024 (-)
LOC103026001 NA coding upstream 101253 18379794 ~ 18385052 (-)
nlgn3 nlgn3,nlgn3a,LOC107689138,LOC107663109 coding upstream 146217 18424758 ~ 18636999 (-)
G206434 NA non-coding downstream 1936 18270463 ~ 18274321 (-)
LOC103029928 NA non-coding downstream 89470 18183427 ~ 18186787 (-)
LOC111195818 NA non-coding downstream 153770 18113718 ~ 18122487 (-)
G206348 NA non-coding downstream 237108 18034140 ~ 18039149 (-)
G206271 LOC108436176 non-coding downstream 373693 17901879 ~ 17902564 (-)
G206443 NA non-coding upstream 1270 18279811 ~ 18280130 (-)
G206444 nsdhl non-coding upstream 5352 18283893 ~ 18286260 (-)
G206446 nsdhl non-coding upstream 10434 18288975 ~ 18302819 (-)
G206460 NA non-coding upstream 70214 18348755 ~ 18349791 (-)
G206457 NA non-coding upstream 72521 18351062 ~ 18353411 (-)
LOC111195732 NA other downstream 234318 18039675 ~ 18041939 (-)
LOC103033759 NA other downstream 424066 17843966 ~ 17852191 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other downstream 975264 17259786 ~ 17300993 (-)
drp2 drp2,LOC107724836,LOC107593231 other downstream 1910610 16203937 ~ 16365647 (-)
G205670 NA other downstream 2444163 15831650 ~ 15832094 (-)
G206575 NA other upstream 559828 18838369 ~ 18838916 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other upstream 759153 19037694 ~ 19127726 (-)
LOC103046671 NA other upstream 1646490 19925031 ~ 19994802 (-)
LOC103046056 NA other upstream 1678936 19957477 ~ 19968031 (-)
LOC103040644 LOC108443111 other upstream 1828556 20107097 ~ 20274905 (-)

Expression


Co-expression Network