G206569


Basic Information

Item Value
gene id G206569
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 18806439 ~ 18806680 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU280281
tttaggtttcatgtctaaattggagcagcctggtgttcaatcttcattaattgcacattaatgcaccagtaagagcagagtgtgaaggttcaattagcagggtaagagcacagttctgctctaaatattgcaatgaacacaacattatggggacataccagagttcaaaagaggacaaattgttggtgcacgtcttgctggagcatctgtgaccaagacagcaagtctttgtgatgcatcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280281 True 242 lncRNA 0.41 1 18806439 18806680

Neighbor

gene id symbol gene type direction distance location
nlgn3 nlgn3,nlgn3a,LOC107689138,LOC107663109 coding downstream 169440 18424758 ~ 18636999 (-)
LOC103026001 NA coding downstream 421387 18379794 ~ 18385052 (-)
LOC103044618 plp1,LOC107689137,LOC107554657,LOC103135636,LOC103135639,LOC108242072 coding downstream 436415 18356989 ~ 18370024 (-)
fut11 fut11,LOC107689135,LOC107710942,LOC107733430,LOC107663104 coding downstream 463436 18337692 ~ 18343003 (-)
LOC103028142 cetn2,LOC108436166,LOC102228171 coding downstream 523540 18280633 ~ 18282899 (-)
fgf16 fgf16,LOC107654780,LOC107731802,LOC107575101,LOC107746175 coding upstream 451918 19258598 ~ 19268334 (-)
LOC103038011 uprt,LOC108440089,LOC108443770 coding upstream 544221 19350901 ~ 19359251 (-)
LOC103041563 LOC108440096,LOC103359160 coding upstream 769817 19576497 ~ 19584235 (-)
LOC103021299 NA coding upstream 787624 19594304 ~ 19600998 (-)
LOC103041262 LOC108440093 coding upstream 799345 19606025 ~ 19623243 (-)
G206467 NA non-coding downstream 399694 18406536 ~ 18406745 (-)
G206466 NA non-coding downstream 405526 18400693 ~ 18400913 (-)
G206462 NA non-coding downstream 430201 18376037 ~ 18376238 (-)
G206457 NA non-coding downstream 453028 18351062 ~ 18353411 (-)
G206460 NA non-coding downstream 456648 18348755 ~ 18349791 (-)
G206570 NA non-coding upstream 6306 18812986 ~ 18813304 (-)
G206583 NA non-coding upstream 117135 18923815 ~ 19087671 (-)
G206584 LOC107566009,LOC107568987,LOC107689141 non-coding upstream 164839 18971519 ~ 18985721 (-)
G206585 NA non-coding upstream 206555 19013235 ~ 19021856 (-)
G206586 NA non-coding upstream 209142 19015822 ~ 19019907 (-)
LOC111195732 NA other downstream 764500 18039675 ~ 18041939 (-)
LOC103033759 NA other downstream 954248 17843966 ~ 17852191 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other downstream 1505446 17259786 ~ 17300993 (-)
drp2 drp2,LOC107724836,LOC107593231 other downstream 2440792 16203937 ~ 16365647 (-)
G205670 NA other downstream 2974345 15831650 ~ 15832094 (-)
G206575 NA other upstream 31689 18838369 ~ 18838916 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other upstream 231014 19037694 ~ 19127726 (-)
LOC103046671 NA other upstream 1118351 19925031 ~ 19994802 (-)
LOC103046056 NA other upstream 1150797 19957477 ~ 19968031 (-)
LOC103040644 LOC108443111 other upstream 1300417 20107097 ~ 20274905 (-)

Expression


Co-expression Network