G206575


Basic Information

Item Value
gene id G206575
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 18838369 ~ 18838916 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU280287
ctctctctctctctcattctctctctctctctctctctgcgcatGCGTGAGCGTGAGTGCTGGAGGAAgcggagggtgtgtgtgagagcgctTGGCGTTTTGCCGaactttttgttgttgttaagtTTCGTTTTCGTTTTGATTGAGTGGattgtttgagtgtgtgagtgagtttatctgcgtgtgtgtgtggtgtagcggtgtggtgtgtgtgcgcgctgctgagcgcgggtgtgtgtgtgtgagtgtgtgtgtgtgtgtggcgtgaGCGTGGTATGGCCTGGTCTGCGGCTGCTCGGAGGAGCTCTGCGGCTCCAAGGAGTTCGCCGTTTGAGCAGCTCTCCAGGCAGAATGGAGTAAAGTTCGCCTGTAAGGCGAGTATAGAGAGCTGCTGTCTGGCTGTTGGAGAAAGTGTGGGACATGAAAACGTGCTGTCAGCGTCCCGCATGATTAACTCCATGGTCATGTTTTTAAACACCGTGGAAAGAGCGAACGACCTGATCAGTAAGGGAGTAATTATTAACGGTCAGCTTTTCTCCGGTGTTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280287 True 548 TUCP 0.53 1 18838369 18838916

Neighbor

gene id symbol gene type direction distance location
nlgn3 nlgn3,nlgn3a,LOC107689138,LOC107663109 coding downstream 201370 18424758 ~ 18636999 (-)
LOC103026001 NA coding downstream 453317 18379794 ~ 18385052 (-)
LOC103044618 plp1,LOC107689137,LOC107554657,LOC103135636,LOC103135639,LOC108242072 coding downstream 468345 18356989 ~ 18370024 (-)
fut11 fut11,LOC107689135,LOC107710942,LOC107733430,LOC107663104 coding downstream 495366 18337692 ~ 18343003 (-)
LOC103028142 cetn2,LOC108436166,LOC102228171 coding downstream 555470 18280633 ~ 18282899 (-)
fgf16 fgf16,LOC107654780,LOC107731802,LOC107575101,LOC107746175 coding upstream 419682 19258598 ~ 19268334 (-)
LOC103038011 uprt,LOC108440089,LOC108443770 coding upstream 511985 19350901 ~ 19359251 (-)
LOC103041563 LOC108440096,LOC103359160 coding upstream 737581 19576497 ~ 19584235 (-)
LOC103021299 NA coding upstream 755388 19594304 ~ 19600998 (-)
LOC103041262 LOC108440093 coding upstream 767109 19606025 ~ 19623243 (-)
G206570 NA non-coding downstream 25065 18812986 ~ 18813304 (-)
G206569 NA non-coding downstream 31689 18806439 ~ 18806680 (-)
G206467 NA non-coding downstream 431624 18406536 ~ 18406745 (-)
G206466 NA non-coding downstream 437456 18400693 ~ 18400913 (-)
G206462 NA non-coding downstream 462131 18376037 ~ 18376238 (-)
G206583 NA non-coding upstream 84899 18923815 ~ 19087671 (-)
G206584 LOC107566009,LOC107568987,LOC107689141 non-coding upstream 132603 18971519 ~ 18985721 (-)
G206585 NA non-coding upstream 174319 19013235 ~ 19021856 (-)
G206586 NA non-coding upstream 176906 19015822 ~ 19019907 (-)
G206589 NA non-coding upstream 183238 19022154 ~ 19025381 (-)
LOC111195732 NA other downstream 796430 18039675 ~ 18041939 (-)
LOC103033759 NA other downstream 986178 17843966 ~ 17852191 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other downstream 1537376 17259786 ~ 17300993 (-)
drp2 drp2,LOC107724836,LOC107593231 other downstream 2472722 16203937 ~ 16365647 (-)
G205670 NA other downstream 3006275 15831650 ~ 15832094 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other upstream 198778 19037694 ~ 19127726 (-)
LOC103046671 NA other upstream 1086115 19925031 ~ 19994802 (-)
LOC103046056 NA other upstream 1118561 19957477 ~ 19968031 (-)
LOC103040644 LOC108443111 other upstream 1268181 20107097 ~ 20274905 (-)
LOC103040850 hmgn5 other upstream 1624787 20463703 ~ 20512287 (-)

Expression


Co-expression Network