G206613


Basic Information

Item Value
gene id G206613
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 19256544 ~ 19257031 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU280355
gaagattggccaccaggctgctccaatttagacatgaaacctaaaatcccacactaaaatgatgacaggtgtttcagttccattgtccaacccctgtaggtgaTGTATTCTTATATGATGTTAAAACCAGGGAAAAGCTAAGGCTAAGGCATACGCAGGAATAGTAGTAGGAGTGTAGAGAAGAATAAAAGTGTGGTTTGATTGATGAAATGATTGATAAAAAGGAGTGACTTGTAATGTTCAGGCTGTCAGGAACATTATTAAAATGCAAGTGGCAGATGTAAATATGGATGAACCTATTTATAAGatgtacaatatatttattttctacatataAAGTATAATTCTaaatctctatatatatatataaatatatttatttattgcaaagTCTTTATTTTGTAATGAACTTGAAATTATAAGAACTGTAAATTCTACtgaaattacacaaaaaaaggGCCAACATCAATTTGACCTGAATGGATGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280355 True 488 lncRNA 0.32 1 19256544 19257031

Neighbor

gene id symbol gene type direction distance location
nlgn3 nlgn3,nlgn3a,LOC107689138,LOC107663109 coding downstream 619545 18424758 ~ 18636999 (-)
LOC103026001 NA coding downstream 871492 18379794 ~ 18385052 (-)
LOC103044618 plp1,LOC107689137,LOC107554657,LOC103135636,LOC103135639,LOC108242072 coding downstream 886520 18356989 ~ 18370024 (-)
fut11 fut11,LOC107689135,LOC107710942,LOC107733430,LOC107663104 coding downstream 913541 18337692 ~ 18343003 (-)
LOC103028142 cetn2,LOC108436166,LOC102228171 coding downstream 973645 18280633 ~ 18282899 (-)
fgf16 fgf16,LOC107654780,LOC107731802,LOC107575101,LOC107746175 coding upstream 1567 19258598 ~ 19268334 (-)
LOC103038011 uprt,LOC108440089,LOC108443770 coding upstream 93870 19350901 ~ 19359251 (-)
LOC103041563 LOC108440096,LOC103359160 coding upstream 319466 19576497 ~ 19584235 (-)
LOC103021299 NA coding upstream 337273 19594304 ~ 19600998 (-)
LOC103041262 LOC108440093 coding upstream 348994 19606025 ~ 19623243 (-)
G206597 NA non-coding downstream 85905 19160405 ~ 19170639 (-)
G206593 NA non-coding downstream 117087 19063499 ~ 19139457 (-)
G206595 magt1,LOC107566011,LOC106604089,LOC106592046,LOC107689142 non-coding downstream 118897 19134598 ~ 19137647 (-)
G206589 NA non-coding downstream 231163 19022154 ~ 19025381 (-)
G206585 NA non-coding downstream 234688 19013235 ~ 19021856 (-)
G206629 abcb7 non-coding upstream 147179 19404210 ~ 19407338 (-)
G206640 NA non-coding upstream 238401 19495432 ~ 19511159 (-)
G206634 NA non-coding upstream 257086 19514117 ~ 19516119 (-)
G206653 NA non-coding upstream 309181 19566212 ~ 19566544 (-)
G206685 NA non-coding upstream 344568 19601599 ~ 19681210 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other downstream 128818 19037694 ~ 19127726 (-)
G206575 NA other downstream 417628 18838369 ~ 18838916 (-)
LOC111195732 NA other downstream 1214605 18039675 ~ 18041939 (-)
LOC103033759 NA other downstream 1404353 17843966 ~ 17852191 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other downstream 1955551 17259786 ~ 17300993 (-)
LOC103046671 NA other upstream 668000 19925031 ~ 19994802 (-)
LOC103046056 NA other upstream 700446 19957477 ~ 19968031 (-)
LOC103040644 LOC108443111 other upstream 850066 20107097 ~ 20274905 (-)
LOC103040850 hmgn5 other upstream 1206672 20463703 ~ 20512287 (-)
LOC103039395 rps6ka6,rps6kal,LOC107572332,LOC107674878,LOC102207076 other upstream 1420422 20677453 ~ 20782984 (-)

Expression


Co-expression Network