G206685


Basic Information

Item Value
gene id G206685
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 19601599 ~ 19681210 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU280436
atcaaattgaaaacctctggaatataatcaagaggaagatggatgatcacaagccatcaaaccaccaaactgaactgcttgaattcatttttgcaccaggagtaaagcagcataaagttatccaaaagcagtgtgtaagactggtggagaaagagaacatgatgccaagatgcatgaaaaaaactcttaaaactttatgaatatgaacttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280436 True 211 lncRNA 0.36 3 19601599 19681210

Neighbor

gene id symbol gene type direction distance location
LOC103021299 NA coding downstream 601 19594304 ~ 19600998 (-)
LOC103041563 LOC108440096,LOC103359160 coding downstream 17364 19576497 ~ 19584235 (-)
LOC103038011 uprt,LOC108440089,LOC108443770 coding downstream 242348 19350901 ~ 19359251 (-)
fgf16 fgf16,LOC107654780,LOC107731802,LOC107575101,LOC107746175 coding downstream 333265 19258598 ~ 19268334 (-)
nlgn3 nlgn3,nlgn3a,LOC107689138,LOC107663109 coding downstream 964600 18424758 ~ 18636999 (-)
znf711 znf711,LOC107684921,LOC107746145,LOC107569605,LOC107674883 coding upstream 224533 19905743 ~ 19913308 (-)
LOC103047376 LOC108413285 coding upstream 233339 19914549 ~ 19932986 (-)
LOC103046360 NA coding upstream 270956 19952166 ~ 19955579 (-)
prps1 prps1,prps1b,LOC103391169,LOC107565138,LOC108413289,LOC104923196,LOC107746314,LOC107684920 coding upstream 287697 19968907 ~ 19977858 (-)
LOC103045046 LOC103045046,LOC108443105,LOC103391141,LOC107573550,LOC108269394,LOC107674873,LOC101076287 coding upstream 396310 20077520 ~ 20084460 (-)
G206653 NA non-coding downstream 35055 19566212 ~ 19566544 (-)
G206634 NA non-coding downstream 85480 19514117 ~ 19516119 (-)
G206640 NA non-coding downstream 90440 19495432 ~ 19511159 (-)
G206629 abcb7 non-coding downstream 194261 19404210 ~ 19407338 (-)
G206613 NA non-coding downstream 344568 19256544 ~ 19257031 (-)
G206763 NA non-coding upstream 133764 19814974 ~ 19851961 (-)
G206782 NA non-coding upstream 393215 20074425 ~ 20074690 (-)
G206784 NA non-coding upstream 404967 20086177 ~ 20086493 (-)
G206843 NA non-coding upstream 683704 20364914 ~ 20372471 (-)
G206856 tbx22 non-coding upstream 737106 20418316 ~ 20418553 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other downstream 473873 19037694 ~ 19127726 (-)
G206575 NA other downstream 762683 18838369 ~ 18838916 (-)
LOC111195732 NA other downstream 1559660 18039675 ~ 18041939 (-)
LOC103033759 NA other downstream 1749408 17843966 ~ 17852191 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other downstream 2300606 17259786 ~ 17300993 (-)
LOC103046671 NA other upstream 243821 19925031 ~ 19994802 (-)
LOC103046056 NA other upstream 276267 19957477 ~ 19968031 (-)
LOC103040644 LOC108443111 other upstream 425887 20107097 ~ 20274905 (-)
LOC103040850 hmgn5 other upstream 782493 20463703 ~ 20512287 (-)
LOC103039395 rps6ka6,rps6kal,LOC107572332,LOC107674878,LOC102207076 other upstream 996243 20677453 ~ 20782984 (-)

Expression


Co-expression Network