G206784


Basic Information

Item Value
gene id G206784
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 20086177 ~ 20086493 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU280575
TGACCTGGTTCTCCTCGGTGGGAATGAAAGTCAGACAGAAGAATAAAGCAGTGAGAGTTTTCCCCTGCAGACtgaccatctctctctctctctctctctctctctctctctctctcacacacacacacacgagcttTCCTCCTGATGTCCTCCTGCGTGCTGACTGGTAATAGAAAAGTTATCACTTCTAACTGAGCTGTGATCTGTTATTTAACCGTGTTTCACTTTTTCCCTGTGTTTTACTCTCCTTTCCCTCTCTGAGTAAAAGCTTCCTGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280575 True 278 lncRNA 0.45 2 20086177 20086493

Neighbor

gene id symbol gene type direction distance location
LOC103045046 LOC103045046,LOC108443105,LOC103391141,LOC107573550,LOC108269394,LOC107674873,LOC101076287 coding downstream 1717 20077520 ~ 20084460 (-)
prps1 prps1,prps1b,LOC103391169,LOC107565138,LOC108413289,LOC104923196,LOC107746314,LOC107684920 coding downstream 108319 19968907 ~ 19977858 (-)
LOC103046360 NA coding downstream 130598 19952166 ~ 19955579 (-)
LOC103047376 LOC108413285 coding downstream 153191 19914549 ~ 19932986 (-)
znf711 znf711,LOC107684921,LOC107746145,LOC107569605,LOC107674883 coding downstream 172869 19905743 ~ 19913308 (-)
vamp7 vamp7 coding upstream 13006 20099499 ~ 20104840 (-)
LOC103043510 ednr,LOC103043510,LOC108443108,LOC108268917,LOC104965768,LOC106930986,LOC103470946,LOC106530016,LOC108238010 coding upstream 36654 20123147 ~ 20141059 (-)
LOC103043211 LOC103366304,LOC105906309,LOC108268916,LOC102229095,LOC100704732,LOC107386560,LOC101162152,LOC103395326,LOC105927798 coding upstream 93817 20180310 ~ 20188753 (-)
cysltr1 cysltr1,LOC107703837,LOC107576072,LOC107591877,LOC107688612 coding upstream 153374 20239867 ~ 20244489 (-)
itm2a itm2a coding upstream 286393 20372886 ~ 20382010 (-)
G206782 NA non-coding downstream 11487 20074425 ~ 20074690 (-)
G206763 NA non-coding downstream 234216 19814974 ~ 19851961 (-)
G206685 NA non-coding downstream 404967 19601599 ~ 19681210 (-)
G206653 NA non-coding downstream 519633 19566212 ~ 19566544 (-)
G206634 NA non-coding downstream 570058 19514117 ~ 19516119 (-)
G206843 NA non-coding upstream 278421 20364914 ~ 20372471 (-)
G206856 tbx22 non-coding upstream 331823 20418316 ~ 20418553 (-)
G206859 NA non-coding upstream 447087 20533580 ~ 20537400 (-)
G206912 NA non-coding upstream 631456 20717949 ~ 20725371 (-)
G206991 NA non-coding upstream 1114680 21201173 ~ 21208804 (-)
LOC103046671 NA other downstream 91375 19925031 ~ 19994802 (-)
LOC103046056 NA other downstream 118146 19957477 ~ 19968031 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other downstream 958451 19037694 ~ 19127726 (-)
G206575 NA other downstream 1247261 18838369 ~ 18838916 (-)
LOC111195732 NA other downstream 2044238 18039675 ~ 18041939 (-)
LOC103040644 LOC108443111 other upstream 20604 20107097 ~ 20274905 (-)
LOC103040850 hmgn5 other upstream 377210 20463703 ~ 20512287 (-)
LOC103039395 rps6ka6,rps6kal,LOC107572332,LOC107674878,LOC102207076 other upstream 590960 20677453 ~ 20782984 (-)
LOC103034681 LOC108436714 other upstream 1677611 21764104 ~ 22247113 (-)
LOC111195740 vma21,LOC108436707,LOC106604103 other upstream 1893306 21979799 ~ 21982730 (-)

Expression


Co-expression Network