G206912


Basic Information

Item Value
gene id G206912
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 20717949 ~ 20725371 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU280774
GAAATTCCATTAAATATATTGCAAGAGCTCCCAGGTTAAGCTTGATTTAAATTTGCAtacattttcatacatttaGCAGAAATAAAAGAAGGCTAGCAGCCACCAGAAAGTCATTAAAGACTGCAGTTTCTCTAAGGAGAGGTGATCAGGAGGAAATTGGGAGGAAGCTCAGCAGCGACCAGATACAAAGGACAGCAGGCCTGAGAAGAACCGCTCTGTAATGGATCTCCTCCTTCAGAACCTCTCAGGCAAACACTCTGAACAATGGTGAGGACCAGGGCCCAAACCTGGGGCCGGGAGGTGACGGCACAACAAGAGCCCCGGCCTCGGCCTGCACCTGCACcttattttgtttgtgtgagtctgtctgtctttgtgtgcgtatatatatatatatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280774 True 400 lncRNA 0.46 2 20717949 20725371

Neighbor

gene id symbol gene type direction distance location
LOC103041461 chmp1b,LOC101476317 coding downstream 276453 20433525 ~ 20441496 (-)
itm2a itm2a coding downstream 335939 20372886 ~ 20382010 (-)
cysltr1 cysltr1,LOC107703837,LOC107576072,LOC107591877,LOC107688612 coding downstream 473460 20239867 ~ 20244489 (-)
LOC103043211 LOC103366304,LOC105906309,LOC108268916,LOC102229095,LOC100704732,LOC107386560,LOC101162152,LOC103395326,LOC105927798 coding downstream 529196 20180310 ~ 20188753 (-)
LOC103043510 ednr,LOC103043510,LOC108443108,LOC108268917,LOC104965768,LOC106930986,LOC103470946,LOC106530016,LOC108238010 coding downstream 576890 20123147 ~ 20141059 (-)
hdx hdx coding upstream 60643 20786014 ~ 20800527 (-)
tenm1 tenm1,LOC105906218 coding upstream 255384 20980755 ~ 21355637 (-)
LOC103037071 arhgef9,LOC108436700,LOC108269078 coding upstream 805389 21530760 ~ 21599719 (-)
LOC103036462 LOC108436702,LOC105906303,LOC106604272 coding upstream 887462 21612833 ~ 21617288 (-)
LOC103036162 zc4h2,LOC103036162,LOC108436709,LOC108269407 coding upstream 897873 21623244 ~ 21630047 (-)
G206859 NA non-coding downstream 180549 20533580 ~ 20537400 (-)
G206856 tbx22 non-coding downstream 299396 20418316 ~ 20418553 (-)
G206843 NA non-coding downstream 345478 20364914 ~ 20372471 (-)
G206784 NA non-coding downstream 631456 20086177 ~ 20086493 (-)
G206782 NA non-coding downstream 643259 20074425 ~ 20074690 (-)
G206991 NA non-coding upstream 475802 21201173 ~ 21208804 (-)
G206998 NA non-coding upstream 671343 21396714 ~ 21396928 (-)
G207000 NA non-coding upstream 679086 21404457 ~ 21404698 (-)
G207035 NA non-coding upstream 757467 21482838 ~ 21524192 (-)
G207038 NA non-coding upstream 769243 21494614 ~ 21569589 (-)
LOC103040850 hmgn5 other downstream 205662 20463703 ~ 20512287 (-)
LOC103040644 LOC108443111 other downstream 443044 20107097 ~ 20274905 (-)
LOC103046671 NA other downstream 723147 19925031 ~ 19994802 (-)
LOC103046056 NA other downstream 749918 19957477 ~ 19968031 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other downstream 1590223 19037694 ~ 19127726 (-)
LOC103034681 LOC108436714 other upstream 1038733 21764104 ~ 22247113 (-)
LOC111195740 vma21,LOC108436707,LOC106604103 other upstream 1254428 21979799 ~ 21982730 (-)
LOC103035944 mical3 other upstream 2160061 22885432 ~ 22956024 (-)
LOC103033401 spon1b,LOC108413171,LOC107701107,LOC108269023,LOC107745929,LOC107686649 other upstream 2495098 23220469 ~ 23412954 (-)
dnajc24 dnajc24 other upstream 3213554 23938925 ~ 24020314 (-)

Expression


Co-expression Network