CI01000009_13194613_13197758


Basic Information

Item Value
gene id CI01000009_13194613_13197758
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 13194437 ~ 13199701 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_13194613_13197758.mRNA
ACATAAATCCAGAGCACAGTCGTATTTCAAAGCTCAGCTCCCCTGGCAAACACACAGAGGAAAGCGAAACAGAACAAATCTCAAGCTGCTTTCAACTATTTATGTGGATTGACGGCAGGTCCAGTCTGACACATTCTTTTTAGATGTTCACCGCTGTATTGCATGGGAAAAGAAGCATGCAGACGAATCGATGCCGCTACCCTGAGCGTAAACCGTACTCACCTAAGAGCATGGCTGAAGCGCGCCGTGCGTTTAGGGCTTCTGGTCTCAAAGCCCTTCATCTGGTGTCGAGTTTCCCATGGAACATTTTTAAAGAAATTACACAGAATGCTCTTAGGATCAAGTTACTCTTCTGGCTAGCGATGAGTGCAAGATCCCACATCCAAGAATACAACGGTTCACGACATGTAAATCCGAGGGCTTACAAAGGAGAGATAGACGGACAATGCGTCATGGGAGCAGTTGAGGAAGGGCAGAAAACAAAACGGCAAAATAAATCTGCTTCGGAGAACAATGGTTTGCATAACAACGCTTCGCGCTTCTCTCAGCGCCGCAGTCCCGATCATCTCGACAAATATTCCAGCGTCCAGTCGGTGCCCGCGGAGCCCAGGAGGTTATGAGGGTTATCGCACCCTCCCCCCCAGGAGGTGCTGATGTGATTTACAGGGACAGGGACAGCGGCATCTGTTTGCAACATTTCAGCAACTGAAAGTTTGTCTCCTTCTCTGGTTACAGTGCTGGATAGAGAGGACTTACAAACGCTGATCACTTAGCAGAGTGCCTCCATTACATGCCGAATACTACTCTAACCTTTCTCTGTTTACAACAACATGCAAAGCTAAGGGGGAACTATAAATATATCAAGCATATCAAGGATTCTTTCCATTGACAAAACAATGCCGTCTTGAATTTGGAGCCCTGTGCAGTGTTAAAGGTGAAGTGTGCTGATTCTGCCCCAAAAATGTAATGATTTAAAGGGATCGTTCACTCAAAAATAAAAATGTTGTCAATTTTTCTGCCTCACGCCATTCCAAAAGAATAAGACTTTGAGACACAAATAATATATTTTACTAAATGTTTTCTGTCACTCCAATGAAAGTCCAAGTAAGCAAATTTCAAAGAACCAAAAATGTCATAAAGGCGTCGTAAAATGAATCCATATGATTCGAGAGGTCATATAATGCAAGTCTTGTGAAGAGATACAATCACTTTATATGAACAACAGATTTAATTTAGATTTAATCTAAACATTGTGCACCACAAGTACTTAGAGCTCATCACATATGGTAAACATGGAAGCTTAAACATGCTCAAGCACAAGCTTCCATGTTTACCATATGTGATGTGCTCTAGTTATGTGTGTTTGTGTCAAAAAAAGCCTAAATTAAATCTGTTCATCATATAAAGTGATTGTATTCCTTCTCAAGACTTGGATTAAAGTGTTTACTTCATATGGATTCGTTTTAGGACGTCTTTATGACCTTTTGGACATAAAGGCATCATAAAAGGATCCAGGATCTGGACCTTTTGGATTTTTGGTTACCTGGACTTTCAATGGAGGGACAGAAACTTCTCAGGTTTCATTAAAACTTTCGTTTTAATCTGTGTTTCGAATGTGTGTAAACCAAAGTCTTATGGGATTTGAATGAGCAAAAGATGGCATATCGGTCAACTCAAACTCACAGATGGTTTAAAAAAAAAAAAAATGACACCACTGTTAAAGGTGCAGTAAGCGATTTCTGAGAAACGCTGCTGAAAGTGGATCAGACCAAGCACCACAACACACTTGTAGCCAATCAGCAATAGGGGGTGTGTCCACTCATGAGAGAGAGAGTGAGCAAGAGAAATTTGGGGGGGGGGCCCAAAGTCGTTTTGGACCACATTAACTTTCATTGTATGGACAAAAACTGTTAAAACATGCTTCTTTTGTGTTCCACAGAAGACAGAGATTCATACAGTGTTGGAAGACCATGTGTCCCATTTGTCATTTTATGATTCAGAGTGCTCGCAAACAAAGCTTGTGGTCACAATGTGCATGCATTGTGCTTTTTTTTCCCAGCCCACACTGTTGCAGACTTTACGGGGGACTATTACCCAACAGCCCATGTGGCAAAATATAGGATTGTGAACGCTGAGGGTGCCATTTGGGACATTTGGTAAACTGCTCCATTTCACCTTGGTGCTGTCAAAGACATTCATTGGAGAACTGCTGCCCTAAGCGCTTGTTTGGCCTGTTGTCATTGTCTAGGGTAATATAGCATGTGTGAACGGTTAGGAATTGCAGTAAATAATGGCTTCCTCTATAAGGACGCTGTCAGACTCAAAGAGTTGTAAATAATTTTTTTTTTTTTTTTTTCTGGACAATGGCGAATGCGGAAGATAAAGGCACAGAGCATGGAGCAGTTTGTGTCTTCTAACAGGGAGTCAAGTACTTCAGATGGACATAAACTTTTAATAATATCCAGATATCAGCGGCCATTTCTCAGGAGACAAATCAATATGCTTTAAAAAAAAAAGAACATATATCTTATGAAATGAGATGGAAAAATGCAAGCCAGGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_13194613_13197758.mRNA True 2563 mRNA 0.41 3 13194437 13199701

Neighbor

gene id symbol gene type direction distance location
CI01000009_12854692_12859028 NA coding upstream 333406 12854193 ~ 12861031 (+)
CI01000009_12646484_12653748 GULP1, GULP1A coding upstream 540580 12646484 ~ 12653857 (+)
CI01000009_12504532_12504815 NA coding upstream 689543 12504380 ~ 12504894 (+)
CI01000009_12432736_12435509 NA coding upstream 758546 12432538 ~ 12436017 (+)
CI01000009_12387605_12388405 LRRC3 coding upstream 803772 12385222 ~ 12390665 (+)
CI01000009_13394582_13476351 UBE2E3 coding downstream 192605 13392306 ~ 13476807 (+)
CI01000009_13549003_13580198 ITGA4 coding downstream 349302 13549003 ~ 13580233 (+)
CI01000009_13696525_13718933 SSFA2 coding downstream 496824 13696525 ~ 13718933 (+)
CI01000009_13752424_13753460 NA coding downstream 552723 13752424 ~ 13753823 (+)
CI01000009_13798741_13799037 NA coding downstream 597183 13796884 ~ 13799191 (+)
G58023 NA non-coding upstream 69545 13123177 ~ 13124892 (+)
G58004 NA non-coding upstream 132857 13041813 ~ 13061580 (+)
G58005 NA non-coding upstream 147262 13040326 ~ 13047175 (+)
G57739 NA non-coding upstream 268195 12923993 ~ 12926242 (+)
G57756 NA non-coding upstream 599692 12528533 ~ 12594745 (+)
G58088 NA non-coding downstream 25139 13224840 ~ 13225681 (+)
G58103 NA non-coding downstream 46640 13246341 ~ 13248989 (+)
G58118 NA non-coding downstream 69705 13269406 ~ 13269639 (+)
G58153 NA non-coding downstream 135934 13335635 ~ 13335862 (+)
G58155 NA non-coding downstream 144479 13344180 ~ 13344479 (+)
G58028 NA other upstream 50829 13140378 ~ 13143608 (+)
G57701 NA other upstream 171299 13006643 ~ 13023138 (+)
G57691 NA other upstream 275972 12906444 ~ 12918465 (+)
G57682 NA other upstream 302098 12825469 ~ 12892339 (+)
G58382 NA other downstream 833858 14039757 ~ 14039901 (+)
G58455 NA other downstream 1046994 14246695 ~ 14258526 (+)
G58558 NA other downstream 1297235 14496936 ~ 14501514 (+)
G58649 NA other downstream 1450023 14649724 ~ 14652022 (+)
G58711 NA other downstream 1566958 14766659 ~ 14773773 (+)

Expression


Co-expression Network